RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 GFRA2O00451 464 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 WNT10BO00744 389 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 STX7O15400 261 aaKnown RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 ERN1O75460 977 aaKnown RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 SCO1O75880 301 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 CD9P21926 228 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 ITGB7P26010 798 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 HOXA11P31270 313 aaPredicted RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 SLC9A3P48764 834 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 MLLT6P55198 1093 aaPredicted RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 SRP54P61011 504 aaKnown RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 ABHD18Q0P651 414 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 PTGR1Q14914 329 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 ABRAXAS2Q15018 415 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 GPR19Q15760 415 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 RBBP7Q16576 425 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 DCAF4L1Q3SXM0 396 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 TIMM50Q3ZCQ8 353 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 SLC39A12Q504Y0 691 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 SPANXN4Q5MJ08 99 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 PAMR1Q6UXH9 720 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 TMPRSS11AQ6ZMR5 421 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 GALNT11Q8NCW6 608 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 OR6P1Q8NGX9 317 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 CCDC120Q96HB5 630 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 MSLNLQ96KJ4 702 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 CDK15Q96Q40 435 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 OR5M11Q96RB7 305 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 DCLRE1CQ96SD1 692 aaKnown RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 SMOQ99835 787 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 ACAT2Q9BWD1 397 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 RIMKLBQ9ULI2 386 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 PCDHGA2Q9Y5H1 932 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 NPEPPSL1A6NEC2 478 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 FGF10O15520 208 aaPredicted RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 CYP7B1O75881 506 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 GLP2RO95838 553 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 LGI1O95970 557 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 ITGB1P05556 798 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 CAPN1P07384 714 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 CCNYL3P0C7X3 344 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 ICAM2P13598 275 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 PSMA3P25788 255 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 RIN1Q13671 783 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 PCBP2Q15366 365 aaKnown RBP eCLIP7.58□□□□□ -1.24e-15■□□□□ 11.1
CD46-201ENST00000322875 HKDC1Q2TB90 917 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 HABP4Q5JVS0 413 aaKnown RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 SDE2Q6IQ49 451 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 Q6ZPB1 254 aaPredicted RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 CARNMT1Q8N4J0 409 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 DENND6BQ8NEG7 585 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 C9orf43Q8TAL5 461 aaPredicted RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 DNAJA4Q8WW22 397 aaPredicted RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 KIAA1143Q96AT1 154 aaPredicted RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 C7orf34Q96L11 122 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 CEP19Q96LK0 163 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 SLC7A5P2Q9GIP4 190 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 KCNH6Q9H252 994 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 TNFRSF10DQ9UBN6 386 aa7.58□□□□□ -1.2
CD46-201ENST00000322875 EIF2B4Q9UI10 523 aaKnown RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 LSM2Q9Y333 95 aaKnown RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 ARIH1Q9Y4X5 557 aaPredicted RBP7.58□□□□□ -1.2
CD46-201ENST00000322875 ALPK3Q96L96 1907 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 TMEM229AB2RXF0 380 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 ARHGEF9O43307 516 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 FABP3P05413 133 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 SOX9P48436 509 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 MAPK12P53778 367 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 MAP3K7CLP57077 242 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 ST3GAL4Q11206 333 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 SLC14A1Q13336 389 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 XKR4Q5GH76 650 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 IL27RAQ6UWB1 636 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 TSEN54Q7Z6J9 526 aaKnown RBP7.57□□□□□ -1.2
CD46-201ENST00000322875 CTU1Q7Z7A3 348 aaKnown RBP7.57□□□□□ -1.2
CD46-201ENST00000322875 SERPINA11Q86U17 422 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 TAC4Q86UU9 113 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 P3H2Q8IVL5 708 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 GDPD1Q8N9F7 314 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 METTL2AQ96IZ6 378 aaKnown RBP7.57□□□□□ -1.2
CD46-201ENST00000322875 OPALINQ96PE5 141 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 SOSTQ9BQB4 213 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 SP110Q9HB58 689 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 HHATLQ9HCP6 504 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 THUMPD1Q9NXG2 353 aaKnown RBP7.57□□□□□ -1.2
CD46-201ENST00000322875 PIM2Q9P1W9 311 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 ZNF490Q9ULM2 529 aaPredicted RBP7.57□□□□□ -1.2
CD46-201ENST00000322875 VPS4AQ9UN37 437 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 PCDHGB3Q9Y5G1 929 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 SNX8Q9Y5X2 465 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 ALG5Q9Y673 324 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 MICAL3Q7RTP6 2002 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 PATJQ8NI35 1801 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 WASH4PA8MWX3 477 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 PROM1O43490 865 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 TSPAN9O75954 239 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 SLC22A5O76082 557 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 C9P02748 559 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 CRYBB2P43320 205 aa7.57□□□□□ -1.2
CD46-201ENST00000322875 RABGGTBP53611 331 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms