RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 FAM110BQ8TC76 370 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SMARCD2Q92925 531 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 ZHX1-C8orf76Q96EF9 292 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SLC29A1Q99808 456 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 ITM2CQ9NQX7 267 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 ZCCHC3Q9NUD5 404 aaKnown RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SNTNA6NMZ2 147 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 BCKDKO14874 412 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 OR10H2O60403 315 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 ABLIM3O94929 683 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 ZDHHC11BP0C7U3 371 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 C8orf89P0DMQ9 161 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 C1GALT1C1LP0DN25 315 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 CCR7P32248 378 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 KHDRBS1Q07666 443 aaKnown RBP eCLIP6□□□□□ -1.45
PRKDC-201ENST00000314191 TLDC1Q6P9B6 456 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 ARMC8Q8IUR7 673 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 LIN28AQ9H9Z2 209 aaKnown RBP6□□□□□ -1.45
PRKDC-201ENST00000314191 GULP1Q9UBP9 304 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6□□□□□ -1.45
PRKDC-201ENST00000314191 UBFD1O14562 309 aaKnown RBP6□□□□□ -1.45
PRKDC-201ENST00000314191 SBK3P0C264 359 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 HSD11B1LQ7Z5J1 315 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 PACRGLQ8N7B6 248 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 MRPL43Q8N983 215 aaKnown RBP6□□□□□ -1.45
PRKDC-201ENST00000314191 TOX2Q96NM4 488 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 ZNF282Q9UDV7 671 aaPredicted RBP6□□□□□ -1.45
PRKDC-201ENST00000314191 SLC9A8Q9Y2E8 581 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 RGS10O43665 173 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 DLGAP3O95886 979 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 DEFA1P59665 94 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 DEFA3P59666 94 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 ERN2Q76MJ5 926 aaKnown RBP6□□□□□ -1.45
PRKDC-201ENST00000314191 SLC34A3Q8N130 599 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 OR9A1PQ8NGU1 263 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 HHIPL1Q96JK4 782 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 MUS81Q96NY9 551 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 C6orf62Q9GZU0 229 aaPredicted RBP6□□□□□ -1.45
PRKDC-201ENST00000314191 TRIM39Q9HCM9 518 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 MRPS30Q9NP92 439 aaKnown RBP6□□□□□ -1.45
PRKDC-201ENST00000314191 FZD3Q9NPG1 666 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 MYL12BO14950 172 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 PDPK1O15530 556 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 MATN4O95460 622 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 RPS3P23396 243 aaKnown RBP eCLIP6□□□□□ -1.456e-7■■■■□ 19.9
PRKDC-201ENST00000314191 SERPINB1P30740 379 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 MED22Q15528 200 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 TYSND1Q2T9J0 566 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 SNAP47Q5SQN1 464 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 OR8H2Q8N162 312 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 RNF175Q8N4F7 328 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 FBXL12Q9NXK8 326 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 NUMBLQ9Y6R0 609 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 KIAA1551Q9HCM1 1747 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 ALDOCP09972 364 aaKnown RBP6□□□□□ -1.45
PRKDC-201ENST00000314191 PTX3P26022 381 aaPredicted RBP6□□□□□ -1.45
PRKDC-201ENST00000314191 NOS3P29474 1203 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 SOX6P35712 828 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 TCEAL5Q5H9L2 206 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 KCNH6Q9H252 994 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 TMEM245Q9H330 911 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 LYVE1Q9Y5Y7 322 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 JUPP14923 745 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 MAGEA12P43365 314 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 ZXDBP98169 803 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 SCARB2Q14108 478 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 DUOXA1Q1HG43 343 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 PIGGQ5H8A4 983 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 CTSL3PQ5NE16 218 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 GPR153Q6NV75 609 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 BHLHB9Q6PI77 547 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 TMEM207Q6UWW9 146 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 NPAS3Q8IXF0 933 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 APIPQ96GX9 242 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 CCNDBP1O95273 360 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 C1QAP02745 245 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 C1SP09871 688 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 LINGO3P0C6S8 592 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 RYKP34925 604 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 LRP8Q14114 963 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 ZNHIT3Q15649 155 aaPredicted RBP6□□□□□ -1.45
PRKDC-201ENST00000314191 TAF8Q7Z7C8 310 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 HMGB4Q8WW32 186 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 SMPDL3AQ92484 453 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 PLGRKTQ9HBL7 147 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 ABCA3Q99758 1704 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 SERPINB7O75635 380 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 SNAP29O95721 258 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 CA3P07451 260 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 NT5EP21589 574 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 SLC7A9P82251 487 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 ABHD18Q0P651 414 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 LRRC26Q2I0M4 334 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 JPH3Q8WXH2 748 aaPredicted RBP6□□□□□ -1.45
PRKDC-201ENST00000314191 ABHD8Q96I13 439 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 LRIG1Q96JA1 1093 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 MAELQ96JY0 434 aaKnown RBP6□□□□□ -1.45
PRKDC-201ENST00000314191 PKMYT1Q99640 499 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 NKX2-4Q9H2Z4 354 aa6□□□□□ -1.45
PRKDC-201ENST00000314191 CCM2LQ9NUG4 571 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms