RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ACP5P13686 325 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 RPL10P27635 214 aaKnown RBP20.53■□□□□ 0.88
ATG4D-201ENST00000309469 CLCNKAP51800 687 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 SLBPQ14493 270 aaKnown RBP eCLIP20.53■□□□□ 0.88
ATG4D-201ENST00000309469 PAGE2BQ5JRK9 111 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 THEMIS2Q5TEJ8 643 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 CAPRIN2Q6IMN6 1127 aaKnown RBP20.53■□□□□ 0.88
ATG4D-201ENST00000309469 NXPE4Q6UWF7 544 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 AQP12AQ8IXF9 295 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 RIMKLAQ8IXN7 391 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 OR8J3Q8NGG0 315 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 TESCQ96BS2 214 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 EGLN2Q96KS0 407 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 TIMM29Q9BSF4 260 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 EBPLQ9BY08 206 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 FZD3Q9NPG1 666 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 GEMIN8Q9NWZ8 242 aaKnown RBP20.53■□□□□ 0.88
ATG4D-201ENST00000309469 NEUROG3Q9Y4Z2 214 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 CFAP20Q9Y6A4 193 aaKnown RBP20.53■□□□□ 0.88
ATG4D-201ENST00000309469 COL4A2P08572 1712 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 ARPC2O15144 300 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 DFNA5O60443 496 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 ETHE1O95571 254 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 S100A3P33764 101 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 PPP2CBP62714 309 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 PPP2CAP67775 309 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 PHC1P78364 1004 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 ACSM2AQ08AH3 577 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 ARHGAP19Q14CB8 494 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 PRAMEF14Q5SWL7 426 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 PRAMEF13Q5VWM6 474 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 ACSM2BQ68CK6 577 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 PDSS2Q86YH6 399 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 SPPL2CQ8IUH8 684 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 LAS2Q8IYD9 372 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 ASB12Q8WXK4 309 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 C11orf24Q96F05 449 aaPredicted RBP20.53■□□□□ 0.88
ATG4D-201ENST00000309469 PRO3102Q9H379 93 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 TRIT1Q9H3H1 467 aaKnown RBP20.53■□□□□ 0.88
ATG4D-201ENST00000309469 BATF3Q9NR55 127 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 VAPAQ9P0L0 249 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 PPT2Q9UMR5 302 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 SNX13Q9Y5W8 968 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 ERGP11308 486 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 ACADMP11310 421 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 PRPS1L1P21108 318 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 HTR1EP28566 365 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 HSD17B2P37059 387 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 MTPNP58546 118 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 SELPLGQ14242 412 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 HIST2H2ACQ16777 129 aaPredicted RBP20.52■□□□□ 0.88
ATG4D-201ENST00000309469 C10orf62Q5T681 223 aaPredicted RBP20.52■□□□□ 0.88
ATG4D-201ENST00000309469 HIST2H2AA3Q6FI13 130 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 LCTLQ6UWM7 567 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 SYT12Q8IV01 421 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 C2orf73Q8N5S3 287 aaPredicted RBP20.52■□□□□ 0.88
ATG4D-201ENST00000309469 RPLP0P6Q8NHW5 317 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 BTBD1Q9H0C5 482 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 PRM3Q9NNZ6 103 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 WDR37Q9Y2I8 494 aa20.52■□□□□ 0.88
ATG4D-201ENST00000309469 PIPSLA2A3N6 862 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 ZNF839A8K0R7 811 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 CACNB4O00305 520 aaPredicted RBP20.51■□□□□ 0.87
ATG4D-201ENST00000309469 MYO1DO94832 1006 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 LRATO95237 230 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 RPS13P62277 151 aaKnown RBP20.51■□□□□ 0.87
ATG4D-201ENST00000309469 SFSWAPQ12872 951 aaKnown RBP20.51■□□□□ 0.87
ATG4D-201ENST00000309469 LAPTM5Q13571 262 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 PGS1Q32NB8 556 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 SFT2D3Q587I9 215 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 EOGTQ5NDL2 527 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 IRAK1BP1Q5VVH5 260 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 ANO7Q6IWH7 933 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 TMEM92Q6UXU6 159 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 TBC1D21Q8IYX1 336 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 TMEM102Q8N9M5 508 aaPredicted RBP20.51■□□□□ 0.87
ATG4D-201ENST00000309469 GOLM1Q8NBJ4 401 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 DNAJB8Q8NHS0 232 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 CHTF18Q8WVB6 975 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 HHIPQ96QV1 700 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 MYOCQ99972 504 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 HAUS8Q9BT25 410 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 UNC80Q8N2C7 3258 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 FOXE1O00358 373 aaPredicted RBP20.51■□□□□ 0.87
ATG4D-201ENST00000309469 PRMT3O60678 531 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 FXNQ16595 210 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 CYP2A13Q16696 494 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 GRAMD1BQ3KR37 738 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 PYCR3Q53H96 274 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 IRGCQ6NXR0 463 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 KIAA1324Q6UXG2 1013 aaKnown RBP20.51■□□□□ 0.87
ATG4D-201ENST00000309469 PLCD3Q8N3E9 789 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 CANT1Q8WVQ1 401 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 INSM2Q96T92 566 aaPredicted RBP20.51■□□□□ 0.87
ATG4D-201ENST00000309469 EFHD1Q9BUP0 239 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 KCNH6Q9H252 994 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 OSGEPL1Q9H4B0 414 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 PIF1Q9H611 641 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 RMND5AQ9H871 391 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms