RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 NXNL1Q96CM4 212 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ZFYVE21Q9BQ24 234 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PLCD4Q9BRC7 762 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SGPP1Q9BX95 441 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 EPB41L4BQ9H329 900 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ACTR5Q9H9F9 607 aaPredicted RBP10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SLC6A20Q9NP91 592 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 IGSF5Q9NSI5 407 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TXLNGQ9NUQ3 528 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PCMTD2Q9NV79 361 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 EURLQ9NYK6 297 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TBK1Q9UHD2 729 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SNX7Q9UNH6 387 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SRPK3Q9UPE1 567 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TMEM184BQ9Y519 407 aaPredicted RBP10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KLK4Q9Y5K2 254 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 AP1M2Q9Y6Q5 423 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 URB1O60287 2271 aaKnown RBP10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 FER1L5A0AVI2 2057 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 A0A0J9YVX5 310 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 OR2A25A4D2G3 310 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SRRM3A6NNA2 597 aaPredicted RBP10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TAF4O00268 1085 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TIAF1O95411 115 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 DLGAP3O95886 979 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SHBGP04278 402 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KLK3P07288 261 aaPredicted RBP10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 COL6A2P12110 1019 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CDH1P12830 882 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GFAPP14136 432 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 EZRP15311 586 aaKnown RBP10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ZNF28P17035 718 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KRT15P19012 456 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GCAP28676 217 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GMPRP36959 345 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 MAGEA12P43365 314 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 UCNP55089 124 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 DLG1Q12959 904 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PTCHD3Q3KNS1 767 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TMPRSS11BQ86T26 416 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 THOC6Q86W42 341 aaKnown RBP10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PAQR7Q86WK9 346 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 MCATQ8IVS2 390 aaKnown RBP10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SPACA3Q8IXA5 215 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GALNT6Q8NCL4 622 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PDPRQ8NCN5 879 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 RHEBL1Q8TAI7 183 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 RHBDF1Q96CC6 855 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 RNF31Q96EP0 1072 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NDC1Q9BTX1 674 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 EFHD1Q9BUP0 239 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TMEM184CQ9NVA4 438 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CUEDC1Q9NWM3 386 aaPredicted RBP10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PILRAQ9UKJ1 303 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PCDHB3Q9Y5E6 796 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KCNE2Q9Y6J6 123 aa10.55□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 A0A087WV48 116 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 H7BY64 318 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 UBXN8O00124 270 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 HAT1O14929 419 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ZNF749O43361 778 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CCNT2O60583 730 aaKnown RBP10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SRPX2O60687 465 aaPredicted RBP10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CDH16O75309 829 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ERLIN1O75477 346 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NTRK1P04629 796 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 EIF2S1P05198 315 aaKnown RBP10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 RBP1P09455 135 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SLCO1A2P46721 670 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GABRA4P48169 554 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 HSPA7P48741 367 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CSRP3P50461 194 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CCR8P51685 355 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ARSFP54793 590 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TMPRSS3P57727 454 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 VSX2P58304 361 aaPredicted RBP10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 RPS15AP62244 130 aaKnown RBP10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ABHD18Q0P651 414 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GRM7Q14831 915 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ZNF425Q6IV72 752 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 LRRC70Q7Z2Q7 622 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ISCA2Q86U28 154 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 DTX1Q86Y01 620 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TDRPQ86YL5 185 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 RIBC1Q8N443 379 aaPredicted RBP10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ZNF655Q8N720 491 aaPredicted RBP10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SNX31Q8N9S9 440 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ZSCAN1Q8NBB4 408 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ACMSDQ8TDX5 336 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 EPS8L3Q8TE67 593 aaKnown RBP10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SLC5A11Q8WWX8 675 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PRAP1Q96NZ9 151 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CCNL2Q96S94 520 aaPredicted RBP10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ATOH8Q96SQ7 321 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NLNQ9BYT8 704 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GPN2Q9H9Y4 310 aaPredicted RBP10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PRM3Q9NNZ6 103 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 DNAJC11Q9NVH1 559 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CCDC88CQ9P219 2028 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CPSF2Q9P2I0 782 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms