RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TAS2R39P59534 338 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 HSPA14Q0VDF9 509 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 NFATC3Q12968 1075 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 BTBD16Q32M84 506 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 ARSIQ5FYB1 569 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 FAM151BQ6UXP7 276 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 CERS6Q6ZMG9 384 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 HFE2Q6ZVN8 426 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 LAPTM4BQ86VI4 370 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 LINC01465Q8N7H1 131 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 MUS81Q96NY9 551 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 GTPBP2Q9BX10 602 aaKnown RBP11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 DNAJC11Q9NVH1 559 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 OXSMQ9NWU1 459 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 PLCL2Q9UPR0 1127 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 KRBA1A5PL33 1030 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 RFXAPO00287 272 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 CDK14O94921 469 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 PRAMEF1O95521 474 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 ELK4P28324 431 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 HOXA9P31269 272 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 CLDN10P78369 228 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 ARF5P84085 180 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 C9orf50Q5SZB4 431 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 DCDC5Q6ZRR9 648 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 SCML4Q8N228 414 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 PYROXD2Q8N2H3 581 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 OR9I1Q8NGQ6 314 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 IPCEF1Q8WWN9 437 aaPredicted RBP11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 FGF13Q92913 245 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 FOXJ1Q92949 421 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 FRMD6Q96NE9 622 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 HAPLN2Q9GZV7 340 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 TMEM265A0A087WTH1 108 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 C2orf78A6NCI8 922 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 URADA6NGE7 173 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 CENPBD1B2RD01 187 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 CXCR6O00574 342 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 AP3D1O14617 1153 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 GABRDO14764 452 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 CDH5P33151 784 aaPredicted RBP11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 GRIA1P42261 906 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 RORCP51449 518 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 MVKQ03426 396 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 SMAD4Q13485 552 aaKnown RBP11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 LRIG1Q96JA1 1093 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 NPY6RQ99463 290 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 ZBTB26Q9HCK0 441 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 CXXC1Q9P0U4 656 aaPredicted RBP11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 HIDE1A8MVS5 230 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 ANXA5P08758 320 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 CEBPBP17676 345 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 CAPZA2P47755 286 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 GSK3BP49841 420 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 NTHL1P78549 312 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 OLFML2AQ68BL7 652 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 C22orf39Q6P5X5 142 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 FBXO27Q8NI29 283 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 LRRC15Q8TF66 581 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 LRRC58Q96CX6 371 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 NUS1Q96E22 293 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 TMEM248Q9NWD8 314 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 ZDHHC2Q9UIJ5 367 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 PHF11Q9UIL8 331 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 SNX10Q9Y5X0 201 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 PLD2O14939 933 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 KDELR3O43731 214 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 RPS3P23396 243 aaKnown RBP eCLIP11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 NTSR1P30989 418 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 CACNG1Q06432 222 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 TXNRD3NBQ6F5E7 133 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 STYXQ8WUJ0 223 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 EFHD2Q96C19 240 aaPredicted RBP11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 GPN1Q9HCN4 374 aaPredicted RBP11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 ACTR3BQ9P1U1 418 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 PCDHB1Q9Y5F3 818 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 HEBP2Q9Y5Z4 205 aa11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 OAS3Q9Y6K5 1087 aaKnown RBP11.09□□□□□ -0.63
NPC1L1-201ENST00000289547 RPP40O75818 363 aaKnown RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 MSL3P1P0C860 447 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 MATN1P21941 496 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 TGFBR2P37173 567 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 NR4A2P43354 598 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 DSC2Q02487 901 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 TDGQ13569 410 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ACAP2Q15057 778 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 DUSP6Q16828 381 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 UBAP2Q5T6F2 1119 aaKnown RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 RELL1Q8IUW5 271 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 RAB7BQ96AH8 199 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 LRRC3Q9BY71 257 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 GPN3Q9UHW5 284 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ATPIF1Q9UII2 106 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ANGPT4Q9Y264 503 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 MID1O15344 667 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 SNAP29O95721 258 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 AP2A1O95782 977 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 CRYZL1O95825 349 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 CLK3P49761 638 aaKnown RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 BMXP51813 675 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms