RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 RUNDC3AQ59EK9 446 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 MS4A13Q5J8X5 152 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 C10orf62Q5T681 223 aaPredicted RBP13.84□□□□□ -0.19
VPS26B-201ENST00000281187 MON1AQ86VX9 555 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 DENND1CQ8IV53 801 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 CACTIN-AS1Q8N1I8 211 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 C3orf58Q8NDZ4 430 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 CLIP3Q96DZ5 547 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 SLIRPQ9GZT3 109 aaKnown RBP13.84□□□□□ -0.19
VPS26B-201ENST00000281187 FBXO8Q9NRD0 319 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 GPRC5BQ9NZH0 403 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 UPK1AO00322 258 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 PLK4O00444 970 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 PDE9AO76083 593 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 PRAMEF1O95521 474 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 TRBC1P01850 177 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 ALPIP09923 528 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 KDELR2P33947 212 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 PSEN2P49810 448 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 TAF10Q12962 218 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 LRRC26Q2I0M4 334 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 CTXN3Q4LDR2 81 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 RNASE12Q5GAN4 147 aaKnown RBP13.84□□□□□ -0.19
VPS26B-201ENST00000281187 RGMBQ6NW40 437 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 C8orf82Q6P1X6 216 aaPredicted RBP13.84□□□□□ -0.19
VPS26B-201ENST00000281187 SHQ1Q6PI26 577 aaKnown RBP13.84□□□□□ -0.19
VPS26B-201ENST00000281187 AMIGO1Q86WK6 493 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 TIGD4Q8IY51 512 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 GORASP2Q9H8Y8 452 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 ABCB8Q9NUT2 735 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 PGAP2Q9UHJ9 254 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 SOCS7O14512 581 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 PCDHGA12O60330 932 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 SLC10A3P09131 477 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 KCNE1P15382 129 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 TNNI3P19429 210 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 PGFP49763 221 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 VLDLRP98155 873 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 IL10RBQ08334 325 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 BTN2A3PQ96KV6 586 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 COL21A1Q96P44 957 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 BRINP2Q9C0B6 783 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 ABHD16BQ9H3Z7 469 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 ING3Q9NXR8 418 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 VNN3Q9NY84 501 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 SPATA2Q9UM82 520 aa13.84□□□□□ -0.19
VPS26B-201ENST00000281187 TSPAN4O14817 238 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 OR10H3O60404 316 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 DDNO94850 711 aaPredicted RBP13.83□□□□□ -0.2
VPS26B-201ENST00000281187 CDRT1O95170 752 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 ATF4P18848 351 aaPredicted RBP13.83□□□□□ -0.2
VPS26B-201ENST00000281187 MYL9P24844 172 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 RPIAP49247 311 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 SLC11A2P49281 568 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 IL18Q14116 193 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 BTBD16Q32M84 506 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 SYT6Q5T7P8 510 aaPredicted RBP13.83□□□□□ -0.2
VPS26B-201ENST00000281187 SERPINA9Q86WD7 417 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 DTX3Q8N9I9 347 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 ZNF300Q96RE9 604 aaPredicted RBP13.83□□□□□ -0.2
VPS26B-201ENST00000281187 FBXO44Q9H4M3 255 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 MIOSQ9NXC5 875 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 COL5A3P25940 1745 aaPredicted RBP13.83□□□□□ -0.2
VPS26B-201ENST00000281187 GREB1LQ9C091 1923 aaPredicted RBP13.83□□□□□ -0.2
VPS26B-201ENST00000281187 MEIOCA2RUB1 952 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 CENPBD1B2RD01 187 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 TPST2O60704 377 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 ZNF280AP59817 542 aaPredicted RBP13.83□□□□□ -0.2
VPS26B-201ENST00000281187 NKX3-2P78367 333 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 PROX2Q3B8N5 592 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 SPDYE7PQ495Y7 208 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 IRAK1BP1Q5VVH5 260 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 TUBA3EQ6PEY2 450 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 CCDC28AQ8IWP9 274 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 OR8H3Q8N146 312 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 SNAPC3Q92966 411 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 SH3KBP1Q96B97 665 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 SLC22A4Q9H015 551 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 DNAJC27Q9NZQ0 273 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 MAP4K5Q9Y4K4 846 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 PCDHGB3Q9Y5G1 929 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 SF1Q15637 639 aaKnown RBP13.83□□□□□ -0.2
VPS26B-201ENST00000281187 NXNL2Q5VZ03 156 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 RFPL4BQ6ZWI9 263 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 C16orf62Q7Z3J2 963 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 LRRTM3Q86VH5 581 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 FAM9CQ8IZT9 166 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 DPP10Q8N608 796 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 FRMD6Q96NE9 622 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 MAT2BQ9NZL9 334 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 SLC9A8Q9Y2E8 581 aa13.83□□□□□ -0.2
VPS26B-201ENST00000281187 MRPS7Q9Y2R9 242 aaKnown RBP13.83□□□□□ -0.2
VPS26B-201ENST00000281187 COL1A2P08123 1366 aa13.82□□□□□ -0.2
VPS26B-201ENST00000281187 METTL15A6NJ78 407 aa13.82□□□□□ -0.2
VPS26B-201ENST00000281187 TNFRSF10AO00220 468 aa13.82□□□□□ -0.2
VPS26B-201ENST00000281187 E2F3O00716 465 aa13.82□□□□□ -0.2
VPS26B-201ENST00000281187 INSIG1O15503 277 aa13.82□□□□□ -0.2
VPS26B-201ENST00000281187 TYMPP19971 482 aa13.82□□□□□ -0.2
VPS26B-201ENST00000281187 TNFSF8P32971 234 aa13.82□□□□□ -0.2
VPS26B-201ENST00000281187 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms