RNA–Protein interactions for RNA: ENST00000269967.3

CCDC97-201, Transcript of coiled-coil domain containing 97, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC97, Length 3,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97-201ENST00000269967 PCDH8O95206 1070 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 MYOGP15173 224 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 EPORP19235 508 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 IGFBP5P24593 272 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 PPM1AP35813 382 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 CDK9P50750 372 aaKnown RBP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 MMAAQ8IVH4 418 aaKnown RBP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 SFTPA1Q8IWL2 248 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 EZH1Q92800 747 aaPredicted RBP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 CLP1Q92989 425 aaKnown RBP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 OTUB1Q96FW1 271 aaPredicted RBP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 UHRF1Q96T88 793 aaPredicted RBP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 NPLQ9BXD5 320 aaPredicted RBP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 RERGLQ9H628 205 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 IGFLR1Q9H665 355 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 KAT8Q9H7Z6 458 aaKnown RBP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 DYRK4Q9NR20 520 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 C3orf18Q9UK00 162 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 RTCAO00442 366 aaKnown RBP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 TULP3O75386 442 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 MATN1P21941 496 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 EPHA2P29317 976 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 RPL26P61254 145 aaKnown RBP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 COQ5Q5HYK3 327 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 PTRH1Q86Y79 214 aaKnown RBP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 RASGEF1AQ8N9B8 481 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 MFSD2AQ8NA29 543 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 HM13Q8TCT9 377 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 NTMT1Q9BV86 223 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 RBM38Q9H0Z9 239 aaKnown RBP12.89□□□□□ -0.35
CCDC97-201ENST00000269967 CLMPQ9H6B4 373 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 FAM118AQ9NWS6 357 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 KCNE2Q9Y6J6 123 aa12.89□□□□□ -0.35
CCDC97-201ENST00000269967 LOC100130705A0A1B0GUX0 176 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 TRIM43BA6NCK2 446 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 KPNA5O15131 536 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 RECQL5O94762 991 aaPredicted RBP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 ETHE1O95571 254 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 FADS2O95864 444 aaKnown RBP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 ALPLP05186 524 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 CTSAP10619 480 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 CYP2A6P11509 494 aaPredicted RBP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 RPS3P23396 243 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 DGKGP49619 791 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 RAD23AP54725 363 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 CTBSQ01459 385 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 CD47Q08722 323 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 ILF2Q12905 390 aaKnown RBP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 ZBED5Q49AG3 693 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 CPTPQ5TA50 214 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 TTC23Q5W5X9 447 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 LSRQ86X29 649 aaPredicted RBP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 NELL1Q92832 810 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 GLMNQ92990 594 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 TRIM43Q96BQ3 446 aaPredicted RBP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 SLC12A9Q9BXP2 914 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 RHCGQ9UBD6 479 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 ERVW-1Q9UQF0 538 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 M0R129 80 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 ATG13O75143 517 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 CXCL10P02778 98 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 C8GP07360 202 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 ACPPP15309 386 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 DCTP40126 519 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 RAPSNQ13702 412 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 RUNDC3AQ59EK9 446 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 BROXQ5VW32 411 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 DPP10Q8N608 796 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 ZNF540Q8NDQ6 660 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 VPS37AQ8NEZ2 397 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 OR8J3Q8NGG0 315 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 NEIL2Q969S2 332 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 DUSP26Q9BV47 211 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 TPT1P8Q9HAU6 139 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 TRIM39Q9HCM9 518 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 TRPS1Q9UHF7 1281 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 FZD4Q9ULV1 537 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 GMPPBQ9Y5P6 360 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 BCKDKO14874 412 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 HSMCR30P0CW71 290 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 PTPN2P17706 415 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 MAPK1P28482 360 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 CHI3L1P36222 383 aaPredicted RBP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 MAP2K4P45985 399 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 NUDT6P53370 316 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 SH3BGRP55822 239 aaPredicted RBP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 CLDN8P56748 225 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 GANABQ14697 944 aaKnown RBP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 ERAP2Q6P179 960 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 CEP68Q76N32 757 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 PIWIL3Q7Z3Z3 882 aaKnown RBP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 SNX29P2Q8IUI4 249 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 FAM20CQ8IXL6 584 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 PACRGLQ8N7B6 248 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 GLB1L3Q8NCI6 653 aaPredicted RBP12.88□□□□□ -0.35
CCDC97-201ENST00000269967 OR4A15Q8NGL6 344 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 HUS1BQ8NHY5 278 aa12.88□□□□□ -0.35
CCDC97-201ENST00000269967 STON2Q8WXE9 905 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms