RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 Q6ZSR9 355 aa19.29■□□□□ 0.68
CSPG5-201ENST00000264723 BHLHA9Q7RTU4 235 aa19.29■□□□□ 0.68
CSPG5-201ENST00000264723 VANGL1Q8TAA9 524 aaPredicted RBP19.29■□□□□ 0.68
CSPG5-201ENST00000264723 HMGCLL1Q8TB92 370 aa19.29■□□□□ 0.68
CSPG5-201ENST00000264723 CAPSLQ8WWF8 208 aa19.29■□□□□ 0.68
CSPG5-201ENST00000264723 FAM118AQ9NWS6 357 aa19.29■□□□□ 0.68
CSPG5-201ENST00000264723 PCDHGA8Q9Y5G5 932 aa19.29■□□□□ 0.68
CSPG5-201ENST00000264723 WNT9AO14904 365 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 TPST2O60704 377 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 BMXP51813 675 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 DEFA1P59665 94 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 DEFA3P59666 94 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 MBTPS1Q14703 1052 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 TYW3Q6IPR3 259 aaKnown RBP19.28■□□□□ 0.68
CSPG5-201ENST00000264723 PHF10Q8WUB8 498 aaKnown RBP19.28■□□□□ 0.68
CSPG5-201ENST00000264723 NACC2Q96BF6 587 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 CD244Q9BZW8 370 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 MATN4O95460 622 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 PDYNP01213 254 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 CD36P16671 472 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 AZGP1P25311 298 aaKnown RBP19.28■□□□□ 0.68
CSPG5-201ENST00000264723 YBX1P67809 324 aaKnown RBP19.28■□□□□ 0.68
CSPG5-201ENST00000264723 NETO1Q8TDF5 533 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 IRF7Q92985 503 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 FUNDC2Q9BWH2 189 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 BACE2Q9Y5Z0 518 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 TFECO14948 347 aaPredicted RBP19.28■□□□□ 0.68
CSPG5-201ENST00000264723 CLCN2P51788 898 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 FPGSQ05932 587 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 C11orf91Q3C1V1 193 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 ATP13A5Q4VNC0 1218 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 SPANXN2Q5MJ10 180 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 FAM46CQ5VWP2 391 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 EPHX4Q8IUS5 362 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 OR4K1Q8NGD4 311 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 EHD3Q9NZN3 535 aa19.28■□□□□ 0.68
CSPG5-201ENST00000264723 TNFRSF11BO00300 401 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 RPS17P08708 135 aaKnown RBP19.27■□□□□ 0.68
CSPG5-201ENST00000264723 ATP1B2P14415 290 aaPredicted RBP19.27■□□□□ 0.68
CSPG5-201ENST00000264723 BDKRB1P46663 353 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 HLCSP50747 726 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 MANFP55145 182 aaKnown RBP19.27■□□□□ 0.68
CSPG5-201ENST00000264723 MGAT3Q09327 533 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 PON2Q15165 354 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 RFX4Q33E94 735 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 SLC36A3Q495N2 470 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 SUSD1Q6UWL2 747 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 CHST14Q8NCH0 376 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 ZNF831Q5JPB2 1677 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 SERPINI2O75830 405 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 CLPXO76031 633 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 PRAMEF12O95522 483 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 TNFRSF1BP20333 461 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 CTSOP43234 321 aaPredicted RBP19.27■□□□□ 0.68
CSPG5-201ENST00000264723 PSD4Q8NDX1 1056 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 PROX1Q92786 737 aa19.27■□□□□ 0.68
CSPG5-201ENST00000264723 H2AFY2Q9P0M6 372 aaPredicted RBP19.27■□□□□ 0.68
CSPG5-201ENST00000264723 MATN1P21941 496 aa19.27■□□□□ 0.67
CSPG5-201ENST00000264723 SSR2P43308 183 aa19.27■□□□□ 0.67
CSPG5-201ENST00000264723 HK3P52790 923 aa19.27■□□□□ 0.67
CSPG5-201ENST00000264723 PLA2G16P53816 162 aa19.27■□□□□ 0.67
CSPG5-201ENST00000264723 ZC3H12BQ5HYM0 836 aaKnown RBP19.27■□□□□ 0.67
CSPG5-201ENST00000264723 COLEC12Q5KU26 742 aa19.27■□□□□ 0.67
CSPG5-201ENST00000264723 C8orf4Q9NR00 106 aa19.27■□□□□ 0.67
CSPG5-201ENST00000264723 COL11A1P12107 1806 aaPredicted RBP19.27■□□□□ 0.67
CSPG5-201ENST00000264723 HMGCLP35914 325 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 VIPR2P41587 438 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 OR2T5Q6IEZ7 315 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 OR2T29Q8NH02 315 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 EXOSC8Q96B26 276 aaKnown RBP19.26■□□□□ 0.67
CSPG5-201ENST00000264723 PYURFQ96I23 114 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 MGME1Q9BQP7 344 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 COPS4Q9BT78 406 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 MCMBPQ9BTE3 642 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 SLC32A1Q9H598 525 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 MAGEE1Q9HCI5 957 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 MARCH5Q9NX47 278 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 NCKAP1Q9Y2A7 1128 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 MED26O95402 600 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 HOXD9P28356 352 aaPredicted RBP19.26■□□□□ 0.67
CSPG5-201ENST00000264723 CYBRD1Q53TN4 286 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 UBE2J2Q8N2K1 259 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 C1orf52Q8N6N3 182 aaKnown RBP19.26■□□□□ 0.67
CSPG5-201ENST00000264723 LMNTD1Q8N9Z9 388 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 XAGE5Q8WWM1 108 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 HTATIP2Q9BUP3 242 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 MARCH7Q9H992 704 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 UTS2RQ9UKP6 389 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 PCDHB14Q9Y5E9 798 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 PRSS21Q9Y6M0 314 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 MYO10Q9HD67 2058 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 AIREO43918 545 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 UGT2B11O75310 529 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 B3GALT4O96024 378 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 SOX6P35712 828 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 GPM6BQ13491 265 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 ARMC4Q5T2S8 1044 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 GLB1L3Q8NCI6 653 aaPredicted RBP19.26■□□□□ 0.67
CSPG5-201ENST00000264723 POPDC3Q9HBV1 291 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 PRDM8Q9NQV8 689 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms