RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 IFNA4P05014 189 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 ARSBP15848 533 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 BMPR1AP36894 532 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 GP2P55259 537 aaKnown RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 CAMK2GQ13555 558 aaPredicted RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 YIF1BQ5BJH7 314 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 RETSATQ6NUM9 610 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 NIPA1Q7RTP0 329 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 ZNF680Q8NEM1 530 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 SELENOMQ8WWX9 145 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 ZNF668Q96K58 619 aaPredicted RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 ZNF778Q96MU6 729 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 NT5MQ9NPB1 228 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 TLR8Q9NR97 1041 aaKnown RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 CLTCQ00610 1675 aaKnown RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 SPATA31A6Q5VVP1 1343 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 TUBAL3A6NHL2 446 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 PPEF2O14830 753 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 EEF1E1O43324 174 aaKnown RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 NARSO43776 548 aaKnown RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 EMX2Q04743 252 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 ARHGEF7Q14155 803 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 EIF4HQ15056 248 aaKnown RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 TBCEQ15813 527 aaPredicted RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 IER5Q5VY09 327 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 ELP2Q6IA86 826 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 TRIM43Q96BQ3 446 aaPredicted RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 C11orf54Q9H0W9 315 aaPredicted RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 HOXC10Q9NYD6 342 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 NDRG3Q9UGV2 375 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 AKR7A2O43488 359 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 MFSD11O43934 449 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 ZNF254O75437 659 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 DDX6P26196 483 aaKnown RBP eCLIP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 MEOX2P50222 304 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 OR4D10Q8NGI6 311 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 REEP4Q9H6H4 257 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 RBFOX1Q9NWB1 397 aaKnown RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 RLN2P04090 185 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 YBX3P16989 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 SLC6A2P23975 617 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 B2MP61769 119 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 TGFB2P61812 414 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 OGDHQ02218 1023 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 KRT33BQ14525 404 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 KHDRBS2Q5VWX1 349 aaKnown RBP12.55□□□□□ -0.4
VAMP4-201ENST00000236192 TXNRD3Q86VQ6 643 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 LNX2Q8N448 690 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 MFSD4AQ8N468 514 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 FBXW5Q969U6 566 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 LRRC46Q96FV0 321 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 OR2M2Q96R28 347 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 COA1Q9GZY4 146 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 LRTM1Q9HBL6 345 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 PCDHB14Q9Y5E9 798 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 TRAV19A0A0A6YYK7 116 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 ZNF705EA8MWA4 302 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-201ENST00000236192 ALDH1A2O94788 518 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 IFNA17P01571 189 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 FHP07954 510 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 ADRB1P08588 477 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 RGS6P49758 472 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 PER3P56645 1201 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 MAD2L1BPQ15013 274 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-201ENST00000236192 SHROOM1Q2M3G4 852 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-201ENST00000236192 DPPA2Q7Z7J5 298 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.54□□□□□ -0.46e-8■■■■■ 27.1
VAMP4-201ENST00000236192 ZNF471Q9BX82 626 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-201ENST00000236192 MYH3P11055 1940 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 SMIM30A4D0T7 59 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 FPGTO14772 594 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 MITFO75030 526 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-201ENST00000236192 GLUD2P49448 558 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 RC3H1Q5TC82 1133 aaKnown RBP12.54□□□□□ -0.4
VAMP4-201ENST00000236192 PDE12Q6L8Q7 609 aaKnown RBP12.54□□□□□ -0.4
VAMP4-201ENST00000236192 MSANTD1Q6ZTZ1 278 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 LGI4Q8N135 537 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 OR5B17Q8NGF7 314 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 ZBTB45Q96K62 511 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-201ENST00000236192 ZYG11BQ9C0D3 744 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 QRSL1Q9H0R6 528 aaKnown RBP12.54□□□□□ -0.4
VAMP4-201ENST00000236192 PXDNQ92626 1479 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 A0A075B6Q4 140 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 ZNF98A6NK75 572 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 CDC7O00311 574 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 CDC40O60508 579 aaKnown RBP eCLIP12.54□□□□□ -0.4
VAMP4-201ENST00000236192 PRAMEF2O60811 474 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 VIPP01282 170 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 PDHA2P29803 388 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 ILF3Q12906 894 aaKnown RBP eCLIP12.54□□□□□ -0.4
VAMP4-201ENST00000236192 OPCMLQ14982 345 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 IFI44LQ53G44 452 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 NKX6-2Q9C056 277 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-201ENST00000236192 SYNDIG1Q9H7V2 258 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 BRD9Q9H8M2 597 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 GPR83Q9NYM4 423 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 LOC102723532A0A0G2JNH3 316 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 PRKYO43930 277 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 SOX30O94993 753 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 ALDOBP05062 364 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms