RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TRPC4APQ8TEL6 797 aa26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 DYDC1Q8WWB3 177 aa26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 DPYSL5Q9BPU6 564 aa26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 CFAP54Q96N23 3096 aa26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 IGHV5-10-1A0A0J9YXX1 117 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 SLC9B1P1A6NJY1 282 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 H7BY64 318 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 NRP2O60462 931 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 ST6GAL1P15907 406 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 GRIA3P42263 894 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 RBM44Q6ZP01 1051 aaKnown RBP26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 FRMD7Q6ZUT3 714 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 ARFGAP2Q8N6H7 521 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 DCBLD1Q8N8Z6 715 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 OR52B6Q8NGF0 335 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 ATP6V1E2Q96A05 226 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 CCDC74BQ96LY2 380 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 PRAP1Q96NZ9 151 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 C1GALT1Q9NS00 363 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 GPRC5BQ9NZH0 403 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 APOBEC2Q9Y235 224 aaKnown RBP26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 IGHV5-51A0A0C4DH38 117 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 PPP6CO00743 305 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 CLGNO14967 610 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 PRAMEF10O60809 474 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 KATNA1O75449 491 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 KCNK5O95279 499 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 SEPHS1P49903 392 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 PHF19Q5T6S3 580 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 B3GNT8Q7Z7M8 397 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 RCBTB1Q8NDN9 531 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 FAM76AQ8TAV0 307 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 TRAPPC9Q96Q05 1148 aa26.21■■□□□ 1.79
CHMP4B-201ENST00000217402 AGRPO00253 132 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 OR7A17O14581 309 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 FKBP9O95302 570 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 THRAP10827 490 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 VARSP26640 1264 aaKnown RBP26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 PDX1P52945 283 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 XKR6Q5GH73 641 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 SLCO4C1Q6ZQN7 724 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 PRSS42Q7Z5A4 293 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 SLITRK4Q8IW52 837 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 CDK15Q96Q40 435 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 RTKNQ9BST9 563 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 CAPS2Q9BXY5 557 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 SOHLH2Q9NX45 425 aa26.2■■□□□ 1.78
CHMP4B-201ENST00000217402 SNRNP200O75643 2136 aaKnown RBP26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 DCDC2BA2VCK2 349 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 PRAMEF4O60810 478 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 SERPINE1P05121 402 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 CCNG1P51959 295 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 MEF2AQ02078 507 aaPredicted RBP26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 IRF8Q02556 426 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 CHIT1Q13231 466 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 ZIC1Q15915 447 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 PRAMEF9Q5VWM5 478 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 CES4AQ5XG92 561 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 FIGLAQ6QHK4 219 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 NXPE4Q6UWF7 544 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 MYLK4Q86YV6 388 aaPredicted RBP26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 C19orf47Q8N9M1 422 aaKnown RBP26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 SHCBP1LQ9BZQ2 653 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 ACTR8Q9H981 624 aa26.19■■□□□ 1.78
CHMP4B-201ENST00000217402 PCM1Q15154 2024 aa26.18■■□□□ 1.78
CHMP4B-201ENST00000217402 A0A1B0GTL3 188 aa26.18■■□□□ 1.78
CHMP4B-201ENST00000217402 H2AFYO75367 372 aaKnown RBP26.18■■□□□ 1.78
CHMP4B-201ENST00000217402 SDHBP21912 280 aa26.18■■□□□ 1.78
CHMP4B-201ENST00000217402 CCR8P51685 355 aa26.18■■□□□ 1.78
CHMP4B-201ENST00000217402 LCP2Q13094 533 aa26.18■■□□□ 1.78
CHMP4B-201ENST00000217402 FCRL6Q6DN72 434 aa26.18■■□□□ 1.78
CHMP4B-201ENST00000217402 PDP2Q9P2J9 529 aa26.18■■□□□ 1.78
CHMP4B-201ENST00000217402 DKK1O94907 266 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 TRAF3Q13114 568 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 DOC2AQ14183 400 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 RCN2Q14257 317 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 ABHD11Q8NFV4 315 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 OR6Y1Q8NGX8 325 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 CNDP1Q96KN2 507 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 PLCD4Q9BRC7 762 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 SPNS1Q9H2V7 528 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 PELI2Q9HAT8 420 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 SNX7Q9UNH6 387 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 PIEZO1Q92508 2521 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 NPHS1O60500 1241 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 ZBTB11O95625 1053 aaPredicted RBP26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 MLYCDO95822 493 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 OTCP00480 354 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 C1GALT1C1LP0DN25 315 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 CDK4P11802 303 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 ARL4DP49703 201 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 NAA20P61599 178 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 CSNK1G2P78368 415 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 HES3Q5TGS1 186 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 ATG9BQ674R7 924 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 ZNF425Q6IV72 752 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 PAQR7Q86WK9 346 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 PLD3Q8IV08 490 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 CARFQ8N187 725 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 PRR11Q96HE9 360 aaPredicted RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms