RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Olfr690Q8VH18 315 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 LipfQ9CPP7 395 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Rhox9Q9EQM5 227 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cacna1eQ61290 2272 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 F2P19221 618 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gria2P23819 883 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cct8P42932 548 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 MtpnP62774 118 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Qsox2Q3TMX7 692 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Stox2Q499E5 926 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Sox17Q61473 419 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Tas2r39Q7TQA5 319 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Olfr1051Q7TR76 308 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 TiparpQ8C1B2 657 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 RhdQ8CF94 418 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 HnrnprQ8VHM5 632 aaKnown RBP15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Depdc7Q91WS7 511 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Pop5Q9DB28 169 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Mmp19Q9JHI0 527 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Znf318Q99PP2 2237 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 1810010D01RikA0A1L1SR87 51 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Sema6aO35464 1031 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Uba1yP31254 1058 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cxcl12P40224 93 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Pou4f2Q63934 411 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Lix1Q6P566 282 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Trim50Q810I2 483 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Tmem108Q8BHE4 574 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cd99l2Q8BIF0 237 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Eif3lQ8QZY1 564 aaKnown RBP15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Mat1aQ91X83 396 aaKnown RBP15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cyp2j9Q924D1 502 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Ggt7Q99JP7 662 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Ttc25Q9D4B2 624 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Sertad3Q9ERC3 197 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Clic1Q9Z1Q5 241 aaKnown RBP15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Crybg1A0A0G2JG52 2065 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Olfr1253A2AUA2 318 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Olfr1153A2AVC0 318 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Vmn2r4K7N784 913 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Dlx2P40764 332 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Tmprss9P69525 1065 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Olfr1251Q7TQZ3 318 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cep57Q8CEE0 500 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Hid1Q8R1F6 788 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cxxc5Q91WA4 317 aaKnown RBP15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Coro1bQ9WUM3 484 aaKnown RBP15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Osbpl10S4R1M9 766 aa15.4■□□□□ 0.06
Trim39-203ENSMUST00000113706 Rrn3B2RS91 656 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 F830016B08RikG3UWE2 416 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 H2-M9O19442 342 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 Syn1O88935 706 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 ApoeP08226 311 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 PnpP23492 289 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 Eef1a2P62631 463 aaKnown RBP15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 Syce1lQ5D525 247 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 Trpc1Q61056 793 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cyp2r1Q6VVW9 501 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 Rab36Q8CAM5 267 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 Slc45a3Q8K0H7 553 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 Slc7a8Q9QXW9 531 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 RpgrQ9R0X5 1001 aa15.39■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gm29394H3BIW7 199 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Akr1c6P70694 323 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Slc30a3P97441 388 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Larp7Q05CL8 570 aaKnown RBP15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Q3U4G0 281 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Krtcap2Q5RL79 136 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Dcaf13Q6PAC3 445 aaKnown RBP15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 GanabQ8BHN3 944 aaKnown RBP15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Fbxo9Q8BK06 437 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 StgQ8BM15 349 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Hus1Q8BQY8 280 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Ccdc32Q8BS39 179 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Vmn2r6H3BK29 913 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Fkbp7O54998 218 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 C4bpaP08607 469 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Jak1P52332 1153 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 PamP97467 979 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Padi2Q08642 673 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Smu1Q3UKJ7 513 aaKnown RBP15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Pex11gQ6P6M5 241 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 ZfatQ7TS63 1237 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Fbxl3Q8C4V4 428 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Trim33Q99PP7 1142 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Cldn8Q9Z260 225 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Tnrc18Q80WC3 2878 aa15.39■□□□□ 0.05
Trim39-203ENSMUST00000113706 Mup18A2BIM8 181 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Adam34A2RSG8 714 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Izumo4D3Z690 227 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Xkr6E9Q6C8 638 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Mup11P04938 181 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Sbk2P0C5K1 362 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Znf703P0CL69 594 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Ca3P16015 260 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 C2P21180 760 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Bmp7P23359 430 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Lhx1P63006 406 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Usp39Q3TIX9 564 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Gm21320Q4FZE8 181 aa15.38■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms