RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Vmn2r36K7N741 852 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Irf7P70434 457 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cln6Q3U466 308 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Abhd10Q6PE15 297 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Piwil2Q8CDG1 971 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ces2aQ8QZR3 558 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gtf2f2Q8R0A0 249 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr165Q8VFA2 313 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Serinc3Q9QZI9 472 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Mllt6B1AR10 1109 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Arf3P61205 181 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Rps14P62264 151 aaKnown RBP16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Arf1P84078 181 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pacs2Q3V3Q7 862 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Kctd19Q562E2 927 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Oxa1lQ8BGA9 433 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 SerhlQ9EPB5 311 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cacna1fQ9JIS7 1985 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 4930595D18RikD3Z642 64 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gm6502L7N456 481 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Phc3Q8CHP6 981 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Sdcbp2Q99JZ0 292 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Med31Q9CXU1 131 aaKnown RBP16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Dnase1l2Q9D1G0 278 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ubqln5Q9D4I8 510 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Phlpp1Q8CHE4 1687 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Bmp6P20722 510 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Mmp3P28862 477 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Kctd13Q8BGV7 329 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tmem74Q8BQU7 305 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Bbs4Q8C1Z7 520 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr1090Q8VGA6 313 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pcdhgc3Q91XX1 934 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ssna1Q9JJ94 119 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Hacl1Q9QXE0 581 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 H2-Q10P01898 325 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cdk18Q04899 451 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Muc3aQ3U5A2 218 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Snrnp70Q62376 448 aaKnown RBP16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Setdb2Q8C267 713 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 FRRS1Q8K385 592 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr342Q8VGK7 312 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Rnf181Q9CY62 165 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Q8C0X8 640 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 B4galt4Q9JJ04 344 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Skint3A7TZF0 458 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Spaca6E9Q8Q8 339 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Prkag1O54950 330 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Hoxa10P31310 416 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Adam5Q3TTE0 751 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 AccslQ3UX83 580 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Psmf1Q8BHL8 271 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Svs2Q8BS30 375 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ncbp2Q9CQ49 156 aaKnown RBP16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Rnase10Q9D5A9 208 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 F6Y6L6 278 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gpd1P13707 349 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Psg29Q3URN6 468 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ppp3r2Q63811 179 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Clrn1Q8K445 232 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr1052Q8VGR8 312 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gid4Q9CPY6 217 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Atp13a2Q9CTG6 1169 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Sec23bQ9D662 767 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Impdh1P50096 514 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Oaz1P54369 227 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gnb5P62881 395 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Slain1Q68FF7 579 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Svs1Q6WIZ7 820 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Efemp1Q8BPB5 493 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Dnm1lQ8K1M6 742 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cacul1Q8R0X2 377 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Nufip1Q9QXX8 484 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Vmn2r101E9PZS9 857 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gm21936A0A1Y7VJE9 144 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Fam171a2A2A699 822 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Sec14l1A8Y5H7 715 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 SelenonD3Z2R5 557 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Prl7a1O54830 266 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 GscQ02591 256 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Nmur2Q8BZ39 395 aa16.22■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Disp2Q8CIP5 1345 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Actl10A2AKE7 346 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tango2P54797 276 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Inppl1Q6P549 1257 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Commd7Q8BG94 200 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 MecrQ9DCS3 373 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Mon2Q80TL7 1715 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Zfp612A0A1D5RMC2 672 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gm3072F6SKY8 209 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gm17654F7AXR3 209 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Alox12eP55249 662 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Il6stQ00560 917 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Aarsd1Q3THG9 412 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cyp2d40Q6P8N9 338 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Bclaf1Q8K019 919 aaKnown RBP16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 KlbQ99N32 1043 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ttll6A4Q9E8 822 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pex2P55098 305 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 PrkacbP68181 351 aa16.21■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms