RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ST6GAL1P15907 406 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 TAC1P20366 129 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 CMPK1P30085 196 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 AGTR2P50052 363 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 ABATP80404 500 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 PRDX1Q06830 199 aaKnown RBP15.41■□□□□ 0.06
CLN6-216ENST00000636876 TARDBPQ13148 414 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLN6-216ENST00000636876 C16orf72Q14CZ0 275 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 PFKFB4Q16877 469 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 CCDC153Q494R4 210 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 FBXO48Q5FWF7 155 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 AGBL2Q5U5Z8 902 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 KIAA1614Q5VZ46 1190 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 ICE2Q659A1 982 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 LCTLQ6UWM7 567 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 THOC6Q86W42 341 aaKnown RBP15.41■□□□□ 0.06
CLN6-216ENST00000636876 KMT5CQ86Y97 462 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 PTGR2Q8N8N7 351 aaPredicted RBP15.41■□□□□ 0.06
CLN6-216ENST00000636876 RCBTB1Q8NDN9 531 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 TLCD1Q96CP7 247 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 LIN37Q96GY3 246 aaPredicted RBP15.41■□□□□ 0.06
CLN6-216ENST00000636876 SLC41A2Q96JW4 573 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 TRAPPC9Q96Q05 1148 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 OR4K3Q96R72 315 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 HAUS8Q9BT25 410 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 IQCGQ9H095 443 aaKnown RBP15.41■□□□□ 0.06
CLN6-216ENST00000636876 KLHL25Q9H0H3 589 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 C12orf65Q9H3J6 166 aaKnown RBP15.41■□□□□ 0.06
CLN6-216ENST00000636876 SSU72Q9NP77 194 aaKnown RBP15.41■□□□□ 0.06
CLN6-216ENST00000636876 PLLPQ9Y342 182 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 KIF26BQ2KJY2 2108 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 FAM149AA5PLN7 773 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 A8MT66 165 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 HYAL3O43820 417 aaPredicted RBP15.4■□□□□ 0.06
CLN6-216ENST00000636876 TYROBPO43914 113 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 STK16O75716 305 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 WDR47O94967 919 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 NPPBP16860 134 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 MAGP20916 626 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 ATP5F1P24539 256 aaPredicted RBP15.4■□□□□ 0.06
CLN6-216ENST00000636876 GRIA3P42263 894 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 GDF5P43026 501 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 SEPHS1P49903 392 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 YBX1P67809 324 aaKnown RBP15.4■□□□□ 0.06
CLN6-216ENST00000636876 FOXC1Q12948 553 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 FIGLAQ6QHK4 219 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 LRRC70Q7Z2Q7 622 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 C17orf64Q86WR6 236 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 C19orf47Q8N9M1 422 aaKnown RBP15.4■□□□□ 0.06
CLN6-216ENST00000636876 AGBL5Q8NDL9 886 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 ESAMQ96AP7 390 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 ARL8AQ96BM9 186 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 PHF21BQ96EK2 531 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 PKNOX2Q96KN3 472 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 SH3GL2Q99962 352 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 CD244Q9BZW8 370 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 SLC6A20Q9NP91 592 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 MRPS30Q9NP92 439 aaKnown RBP15.4■□□□□ 0.06
CLN6-216ENST00000636876 DNAJC11Q9NVH1 559 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 SLC22A14Q9Y267 594 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 BTRCQ9Y297 605 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 KLHL20Q9Y2M5 609 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 ASB1Q9Y576 335 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 KLK4Q9Y5K2 254 aa15.4■□□□□ 0.06
CLN6-216ENST00000636876 HEATR5BQ9P2D3 2071 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 CCDC187A0A096LP49 1063 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 LRRC14BA6NHZ5 514 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 STX16-NPEPL1H3BU86 382 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 STX16O14662 325 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 DLX3O60479 287 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 CCNT2O60583 730 aaKnown RBP15.39■□□□□ 0.05
CLN6-216ENST00000636876 NELFEP18615 380 aaKnown RBP15.39■□□□□ 0.05
CLN6-216ENST00000636876 CSTF2P33240 577 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLN6-216ENST00000636876 ARL4DP49703 201 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 HSD11B2P80365 405 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 NFKB2Q00653 900 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 NAA25Q14CX7 972 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 PCBP2Q15366 365 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLN6-216ENST00000636876 ZIC1Q15915 447 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 ZYG11AQ6WRX3 759 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 MARCH9Q86YJ5 346 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 RDH11Q8TC12 318 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 TCP10LQ8TDR4 215 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 ZUFSPQ96AP4 578 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 DPH7Q9BTV6 452 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 CHRNA10Q9GZZ6 450 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 ACBD3Q9H3P7 528 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 CUEDC1Q9NWM3 386 aaPredicted RBP15.39■□□□□ 0.05
CLN6-216ENST00000636876 SOHLH2Q9NX45 425 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 AKAP7Q9P0M2 348 aaPredicted RBP15.39■□□□□ 0.05
CLN6-216ENST00000636876 SLC17A7Q9P2U7 560 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 OPTCQ9UBM4 332 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 MID2Q9UJV3 735 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 SH2B3Q9UQQ2 575 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 DYRK1BQ9Y463 629 aa15.39■□□□□ 0.05
CLN6-216ENST00000636876 TNPO3Q9Y5L0 923 aaKnown RBP15.39■□□□□ 0.05
CLN6-216ENST00000636876 CHD6Q8TD26 2715 aa15.38■□□□□ 0.05
CLN6-216ENST00000636876 IGKV1-8A0A0C4DH67 115 aa15.38■□□□□ 0.05
CLN6-216ENST00000636876 G3V2L1 256 aa15.38■□□□□ 0.05
CLN6-216ENST00000636876 K7EPI3 171 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms