RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 SERTAD3Q9UJW9 196 aa13.69□□□□□ -0.22
CDK7-215ENST00000629350 HIVEP3Q5T1R4 2406 aa13.69□□□□□ -0.22
CDK7-215ENST00000629350 TP73O15350 636 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 RECKO95980 971 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 ESR1P03372 595 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 GABRB3P28472 473 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 CD97P48960 835 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 CCL11P51671 97 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 MLLT10P55197 1068 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 SRSF1Q07955 248 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDK7-215ENST00000629350 POU4F2Q12837 409 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.68□□□□□ -0.22
CDK7-215ENST00000629350 KLHL38Q2WGJ6 581 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 FIGLAQ6QHK4 219 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 SUSD1Q6UWL2 747 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 SHISA6Q6ZSJ9 500 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 ASB18Q6ZVZ8 466 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 PIWIL4Q7Z3Z4 852 aaKnown RBP13.68□□□□□ -0.22
CDK7-215ENST00000629350 HOOK3Q86VS8 718 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 OR2L3Q8NG85 312 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 DLG3Q92796 817 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 CAPZA3Q96KX2 299 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 ZNF285Q96NJ3 590 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 PANX3Q96QZ0 392 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 NDNQ99608 321 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 TRIM51Q9BSJ1 452 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 ACAT2Q9BWD1 397 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 TSSK1BQ9BXA7 367 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 ING2Q9H160 280 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 XAB2Q9HCS7 855 aaKnown RBP13.68□□□□□ -0.22
CDK7-215ENST00000629350 MLXIPLQ9NP71 852 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 CTSFQ9UBX1 484 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 NOVA2Q9UNW9 492 aaKnown RBP13.68□□□□□ -0.22
CDK7-215ENST00000629350 PLCL2Q9UPR0 1127 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 SH2B3Q9UQQ2 575 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 MAD1L1Q9Y6D9 718 aa13.68□□□□□ -0.22
CDK7-215ENST00000629350 SDR42E2A6NKP2 422 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 A6NL46 340 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 MKRN2OSH3BPM6 223 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 PSIP1O75475 530 aaKnown RBP13.67□□□□□ -0.22
CDK7-215ENST00000629350 CEACAM4O75871 244 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 USP1O94782 785 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 STATHP02808 62 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 KLK3P07288 261 aaPredicted RBP13.67□□□□□ -0.22
CDK7-215ENST00000629350 ERVK-10P10266 1014 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 MLNP12872 115 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 ATP5DP30049 168 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 FNTAP49354 379 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 CSRP3P50461 194 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 ADARP55265 1226 aaKnown RBP13.67□□□□□ -0.22
CDK7-215ENST00000629350 MRPS25P82663 173 aaKnown RBP13.67□□□□□ -0.22
CDK7-215ENST00000629350 PTK6Q13882 451 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 CRYMQ14894 314 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 SF1Q15637 639 aaKnown RBP13.67□□□□□ -0.22
CDK7-215ENST00000629350 CYP2A13Q16696 494 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 NKAIN1Q4KMZ8 207 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 HP1BP3Q5SSJ5 553 aaPredicted RBP13.67□□□□□ -0.22
CDK7-215ENST00000629350 RBM20Q5T481 1227 aaKnown RBP13.67□□□□□ -0.22
CDK7-215ENST00000629350 MLIPQ5VWP3 458 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 TCTN3Q6NUS6 607 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 MBOAT1Q6ZNC8 495 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 CPNE9Q8IYJ1 553 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 GPR135Q8IZ08 494 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 FDCSPQ8NFU4 85 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 HMGCLL1Q8TB92 370 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 CD200R1Q8TD46 325 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 C10orf90Q96M02 699 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 PKP4Q99569 1192 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 GPR21Q99679 349 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 C20orf96Q9NUD7 363 aaPredicted RBP13.67□□□□□ -0.22
CDK7-215ENST00000629350 SLC39A10Q9ULF5 831 aa13.67□□□□□ -0.22
CDK7-215ENST00000629350 PTRH2Q9Y3E5 179 aaKnown RBP13.67□□□□□ -0.22
CDK7-215ENST00000629350 A6NJY4 79 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 MYO1CO00159 1063 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 DNALI1O14645 258 aaPredicted RBP13.66□□□□□ -0.22
CDK7-215ENST00000629350 FFAR3O14843 346 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 GPR42O15529 346 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 HAUS5O94927 633 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 CHRM3P20309 590 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 PPARGP37231 505 aaPredicted RBP13.66□□□□□ -0.22
CDK7-215ENST00000629350 EFNA3P52797 238 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 VSX2P58304 361 aaPredicted RBP13.66□□□□□ -0.22
CDK7-215ENST00000629350 HSP90AA5PQ58FG0 334 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 RNF187Q5TA31 235 aaPredicted RBP13.66□□□□□ -0.22
CDK7-215ENST00000629350 CYHR1Q6ZMK1 362 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 TTLL10Q6ZVT0 673 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 RNF44Q7L0R7 432 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 SDCCAG8Q86SQ7 713 aaPredicted RBP13.66□□□□□ -0.22
CDK7-215ENST00000629350 PPIL6Q8IXY8 311 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 LRRC56Q8IYG6 542 aaPredicted RBP13.66□□□□□ -0.22
CDK7-215ENST00000629350 C17orf53Q8N3J3 647 aaPredicted RBP13.66□□□□□ -0.22
CDK7-215ENST00000629350 Q8NA96 180 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 THAP4Q8WY91 577 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 RAD51AP1Q96B01 352 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 PDLIM2Q96JY6 352 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 TCF12Q99081 682 aa13.66□□□□□ -0.22
CDK7-215ENST00000629350 IARS2Q9NSE4 1012 aaKnown RBP13.66□□□□□ -0.22
CDK7-215ENST00000629350 INTS10Q9NVR2 710 aaKnown RBP13.66□□□□□ -0.22
CDK7-215ENST00000629350 CUEDC1Q9NWM3 386 aaPredicted RBP13.66□□□□□ -0.22
CDK7-215ENST00000629350 IRAK4Q9NWZ3 460 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms