RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 DLGAP1O14490 977 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 LILRB5O75023 590 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 RASAL1O95294 804 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 C1orf105O95561 183 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 EPHX1P07099 455 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 ZNF23P17027 643 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 HNF4AP41235 474 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 IL12RB1P42701 662 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 ERVK-21P61565 698 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 GTF2H3Q13889 308 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 DUSP6Q16828 381 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 BCL7AQ4VC05 210 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 OR4F3Q6IEY1 312 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 ADNP2Q6IQ32 1131 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 GRHL2Q6ISB3 625 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 TRMT11Q7Z4G4 463 aaKnown RBP13.2□□□□□ -0.3
NEK3-205ENST00000610828 SPRED1Q7Z699 444 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 RIMKLAQ8IXN7 391 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 OR56A3Q8NH54 315 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 DNAJB8Q8NHS0 232 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 FBXO30Q8TB52 745 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 BDH2Q9BUT1 245 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 MRPS26Q9BYN8 205 aaKnown RBP13.2□□□□□ -0.3
NEK3-205ENST00000610828 OSBPL6Q9BZF3 934 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 KAT8Q9H7Z6 458 aaKnown RBP13.2□□□□□ -0.3
NEK3-205ENST00000610828 GORASP2Q9H8Y8 452 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 GPRC5BQ9NZH0 403 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 ATXN10Q9UBB4 475 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 LIMD1Q9UGP4 676 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 MAN2B2Q9Y2E5 1009 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 A0A096LPI6 279 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 RFXANKO14593 260 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 TFAP2AP05549 437 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 RAP2AP10114 183 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 CDKN2CP42773 168 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 KIR3DL1P43629 444 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 CHRNB3Q05901 458 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 ACSM2AQ08AH3 577 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 MAP7Q14244 749 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 SF1Q15637 639 aaKnown RBP13.19□□□□□ -0.3
NEK3-205ENST00000610828 ZNF658BQ4V348 819 aaPredicted RBP13.19□□□□□ -0.3
NEK3-205ENST00000610828 LRIF1Q5T3J3 769 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 ACSM2BQ68CK6 577 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 TANGO2Q6ICL3 276 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 CRTC3Q6UUV7 619 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 ERN2Q76MJ5 926 aaKnown RBP13.19□□□□□ -0.3
NEK3-205ENST00000610828 ZNF765Q7L2R6 523 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 CACUL1Q86Y37 369 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 FAM86B1Q8N7N1 296 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 FAM47BQ8NA70 645 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 ZNF480Q8WV37 535 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 NCLNQ969V3 563 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 FAM162AQ96A26 154 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 FAM120BQ96EK7 910 aaKnown RBP13.19□□□□□ -0.3
NEK3-205ENST00000610828 SAMD11Q96NU1 681 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 ADI1Q9BV57 179 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 IGFLR1Q9H665 355 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 TRIM39Q9HCM9 518 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 SPATA6Q9NWH7 488 aaPredicted RBP13.19□□□□□ -0.3
NEK3-205ENST00000610828 KCNE2Q9Y6J6 123 aa13.19□□□□□ -0.3
NEK3-205ENST00000610828 MUC22E2RYF6 1773 aaPredicted RBP13.19□□□□□ -0.3
NEK3-205ENST00000610828 A0A1B0GTW7 788 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 MAGEB17A8MXT2 336 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 H0YIV9 168 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 CXCR6O00574 342 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 CLOCKO15516 846 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 GNAO1P09471 354 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 PABPC4LP0CB38 370 aaKnown RBP13.18□□□□□ -0.3
NEK3-205ENST00000610828 ACPPP15309 386 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 PRPS1L1P21108 318 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 RPL5P46777 297 aaKnown RBP13.18□□□□□ -0.3
NEK3-205ENST00000610828 TBPL1P62380 186 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 ZNF33BQ06732 778 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 DPTQ07507 201 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 MERTKQ12866 999 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 STARD3Q14849 445 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 PDGFRLQ15198 375 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 ENPP6Q6UWR7 440 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 TMPRSS11BQ86T26 416 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 ZNF547Q8IVP9 402 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 OR7A2PQ8NGA2 310 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 MAGEE2Q8TD90 523 aaPredicted RBP13.18□□□□□ -0.3
NEK3-205ENST00000610828 CXorf40AQ8TE69 158 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 NEIL2Q969S2 332 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 GRIP2Q9C0E4 1043 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 CAAP1Q9H8G2 361 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 PNPLA3Q9NST1 481 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 GDE1Q9NZC3 331 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 PCDHGA11Q9Y5H2 935 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 C1QTNF3-AMACRE9PGA6 284 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 ZNF8P17098 575 aaPredicted RBP13.18□□□□□ -0.3
NEK3-205ENST00000610828 FCARP24071 287 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 P2RY2P41231 377 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 CLCN2P51788 898 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 ATG9BQ674R7 924 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 TMEM214Q6NUQ4 689 aaKnown RBP13.18□□□□□ -0.3
NEK3-205ENST00000610828 VITQ6UXI7 678 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 DSG4Q86SJ6 1040 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 MICU2Q8IYU8 434 aa13.18□□□□□ -0.3
NEK3-205ENST00000610828 C10orf111Q8N326 155 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms