RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 PSMA3P25788 255 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 MSNP26038 577 aaKnown RBP6.01□□□□□ -1.45
CUX1-220ENST00000607092 PSMB4P28070 264 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 GRNP28799 593 aaKnown RBP6.01□□□□□ -1.45
CUX1-220ENST00000607092 HSD17B2P37059 387 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 TDGF1P3P51864 188 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 EMP2P54851 167 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 EIF3EP60228 445 aaKnown RBP6.01□□□□□ -1.45
CUX1-220ENST00000607092 TMPRSS15P98073 1019 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 KLC1Q07866 573 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 CDH17Q12864 832 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 PTPRCAPQ14761 206 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 DBN1Q16643 649 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 WASHC2DQ5SRD0 308 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 FIGLAQ6QHK4 219 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 AFTPHQ6ULP2 937 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 SPNS3Q6ZMD2 512 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 LRRC6Q86X45 466 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 GAS2L3Q86XJ1 694 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 KLHDC8BQ8IXV7 354 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 DEPDC4Q8N2C3 294 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 TXLNBQ8N3L3 684 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 LMNTD1Q8N9Z9 388 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 FAM98AQ8NCA5 519 aaKnown RBP6.01□□□□□ -1.45
CUX1-220ENST00000607092 FLVCR1-AS1Q8TAF5 88 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 HMGCLL1Q8TB92 370 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 ACTL9Q8TC94 416 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 STT3BQ8TCJ2 826 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 MCOLN3Q8TDD5 553 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 THAP3Q8WTV1 239 aaPredicted RBP6.01□□□□□ -1.45
CUX1-220ENST00000607092 ITLN2Q8WWU7 325 aaPredicted RBP6.01□□□□□ -1.45
CUX1-220ENST00000607092 METTL21AQ8WXB1 218 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 C14orf79Q96F83 325 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 DNAJC1Q96KC8 554 aaKnown RBP6.01□□□□□ -1.45
CUX1-220ENST00000607092 SPOCK3Q9BQ16 436 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 APOL2Q9BQE5 337 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 TUBB6Q9BUF5 446 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 CARD6Q9BX69 1037 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 FAM96AQ9H5X1 160 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 SOX17Q9H6I2 414 aaPredicted RBP6.01□□□□□ -1.45
CUX1-220ENST00000607092 ZNF160Q9HCG1 818 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 MKKSQ9NPJ1 570 aaPredicted RBP6.01□□□□□ -1.45
CUX1-220ENST00000607092 ABHD10Q9NUJ1 306 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 SPHK1Q9NYA1 384 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 IFNKQ9P0W0 207 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 SPATA7Q9P0W8 599 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 MKL2Q9ULH7 1088 aa6.01□□□□□ -1.45
CUX1-220ENST00000607092 MDC1Q14676 2089 aaKnown RBP6.01□□□□□ -1.45
CUX1-220ENST00000607092 FLNAP21333 2647 aaKnown RBP6□□□□□ -1.45
CUX1-220ENST00000607092 DOCK10Q96BY6 2186 aa6□□□□□ -1.45
CUX1-220ENST00000607092 FOXO6A8MYZ6 492 aa6□□□□□ -1.45
CUX1-220ENST00000607092 IDSB3KWA1 339 aa6□□□□□ -1.45
CUX1-220ENST00000607092 H3BMM5 538 aa6□□□□□ -1.45
CUX1-220ENST00000607092 TTI1O43156 1089 aa6□□□□□ -1.45
CUX1-220ENST00000607092 PJA2O43164 708 aa6□□□□□ -1.45
CUX1-220ENST00000607092 SLC19A2O60779 497 aa6□□□□□ -1.45
CUX1-220ENST00000607092 SUN1O94901 812 aa6□□□□□ -1.45
CUX1-220ENST00000607092 CLDN14O95500 239 aa6□□□□□ -1.45
CUX1-220ENST00000607092 HEXBP07686 556 aa6□□□□□ -1.45
CUX1-220ENST00000607092 PRR35P0CG20 571 aa6□□□□□ -1.45
CUX1-220ENST00000607092 PRF1P14222 555 aa6□□□□□ -1.45
CUX1-220ENST00000607092 CD1EP15812 388 aa6□□□□□ -1.45
CUX1-220ENST00000607092 CMPK1P30085 196 aa6□□□□□ -1.45
CUX1-220ENST00000607092 MAGEA1P43355 309 aa6□□□□□ -1.45
CUX1-220ENST00000607092 TTPAP49638 278 aa6□□□□□ -1.45
CUX1-220ENST00000607092 RWDD2BP57060 319 aa6□□□□□ -1.45
CUX1-220ENST00000607092 VSX2P58304 361 aaPredicted RBP6□□□□□ -1.45
CUX1-220ENST00000607092 PRAMEP78395 509 aa6□□□□□ -1.45
CUX1-220ENST00000607092 RELAQ04206 551 aa6□□□□□ -1.45
CUX1-220ENST00000607092 HSPA14Q0VDF9 509 aa6□□□□□ -1.45
CUX1-220ENST00000607092 POU6F1Q14863 301 aa6□□□□□ -1.45
CUX1-220ENST00000607092 SPA17Q15506 151 aa6□□□□□ -1.45
CUX1-220ENST00000607092 NDUFA9Q16795 377 aa6□□□□□ -1.45
CUX1-220ENST00000607092 FASTKD1Q53R41 847 aaKnown RBP6□□□□□ -1.45
CUX1-220ENST00000607092 MEI1Q5TIA1 1274 aa6□□□□□ -1.45
CUX1-220ENST00000607092 ATG9BQ674R7 924 aa6□□□□□ -1.45
CUX1-220ENST00000607092 DENND5AQ6IQ26 1287 aa6□□□□□ -1.45
CUX1-220ENST00000607092 LUZP1Q86V48 1076 aa6□□□□□ -1.45
CUX1-220ENST00000607092 PIANPQ8IYJ0 282 aa6□□□□□ -1.45
CUX1-220ENST00000607092 MPP5Q8N3R9 675 aa6□□□□□ -1.45
CUX1-220ENST00000607092 DNAAF3Q8N9W5 541 aa6□□□□□ -1.45
CUX1-220ENST00000607092 TMEM178AQ8NBL3 297 aa6□□□□□ -1.45
CUX1-220ENST00000607092 KRT35Q92764 455 aa6□□□□□ -1.45
CUX1-220ENST00000607092 WNT2BQ93097 391 aa6□□□□□ -1.45
CUX1-220ENST00000607092 MTFMTQ96DP5 389 aaKnown RBP6□□□□□ -1.45
CUX1-220ENST00000607092 CCDC120Q96HB5 630 aa6□□□□□ -1.45
CUX1-220ENST00000607092 CABS1Q96KC9 395 aa6□□□□□ -1.45
CUX1-220ENST00000607092 ZNF354BQ96LW1 612 aa6□□□□□ -1.45
CUX1-220ENST00000607092 EBNA1BP2Q99848 306 aaKnown RBP6□□□□□ -1.45
CUX1-220ENST00000607092 ZFYVE21Q9BQ24 234 aa6□□□□□ -1.45
CUX1-220ENST00000607092 HEMGNQ9BXL5 484 aa6□□□□□ -1.45
CUX1-220ENST00000607092 OSBPL8Q9BZF1 889 aa6□□□□□ -1.45
CUX1-220ENST00000607092 FAM129AQ9BZQ8 928 aa6□□□□□ -1.45
CUX1-220ENST00000607092 TGIF2Q9GZN2 237 aa6□□□□□ -1.45
CUX1-220ENST00000607092 TSPY26PQ9H489 355 aa6□□□□□ -1.45
CUX1-220ENST00000607092 FAM114A2Q9NRY5 505 aa6□□□□□ -1.45
CUX1-220ENST00000607092 SPTLC3Q9NUV7 552 aa6□□□□□ -1.45
CUX1-220ENST00000607092 COQ3Q9NZJ6 369 aa6□□□□□ -1.45
CUX1-220ENST00000607092 PTGFRNQ9P2B2 879 aa6□□□□□ -1.45
CUX1-220ENST00000607092 TRPC4Q9UBN4 977 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms