RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	ZNF169	Q14929	603 aa	Predicted RBP	10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	FAM214A	Q32MH5	1076 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	RNF44	Q7L0R7	432 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	LRRC6	Q86X45	466 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	MPP5	Q8N3R9	675 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	RAB42	Q8N4Z0	105 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	RNF10	Q8N5U6	811 aa	Known RBP	10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	ST6GALNAC3	Q8NDV1	305 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	HMGCLL1	Q8TB92	370 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	LPGAT1	Q92604	370 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	ZUFSP	Q96AP4	578 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	MFSD3	Q96ES6	412 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	C10orf90	Q96M02	699 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	BIRC8	Q96P09	236 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	DPH7	Q9BTV6	452 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	IL22	Q9GZX6	179 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	LHPP	Q9H008	270 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	SYNPO2L	Q9H987	977 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	ZNF160	Q9HCG1	818 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	ZNF304	Q9HCX3	659 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	ENAM	Q9NRM1	1142 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	AGPAT4	Q9NRZ5	378 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	GALP	Q9UBC7	116 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	C3orf18	Q9UK00	162 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	KLK4	Q9Y5K2	254 aa		10.05	□□□□□ -0.8
LSM4-205	ENST00000597776	DOCK10	Q96BY6	2186 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	LRBA	P50851	2863 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	TCRBV7S3A2	A0A539	114 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	OR2A25	A4D2G3	310 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	ARHGEF33	A8MVX0	844 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	KPNA5	O15131	536 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	KLHL18	O94889	574 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	F7	P08709	466 aa	Predicted RBP	10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	ZGLP1	P0C6A0	271 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	ERVK-10	P10266	1014 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	ACPP	P15309	386 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	FBL	P22087	321 aa	Known RBP	10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	CCNF	P41002	786 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	TSFM	P43897	325 aa	Known RBP	10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	KCNJ1	P48048	391 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	OCA2	Q04671	838 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	TSTA3	Q13630	321 aa	Predicted RBP	10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	GBX1	Q14549	363 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	RPS6KA1	Q15418	735 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	CCNG2	Q16589	344 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	TYSND1	Q2T9J0	566 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	PRTG	Q2VWP7	1150 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	ACSBG2	Q5FVE4	666 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	VWA2	Q5GFL6	755 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	MEI1	Q5TIA1	1274 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	PRMT9	Q6P2P2	845 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	FBXO42	Q6P3S6	717 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	SUSD1	Q6UWL2	747 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	GSTA5	Q7RTV2	222 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	LAPTM4B	Q86VI4	370 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	CATSPER1	Q8NEC5	780 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	MIEF2	Q96C03	454 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	CABS1	Q96KC9	395 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	FOPNL	Q96NB1	174 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	ZFYVE21	Q9BQ24	234 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	TRIM56	Q9BRZ2	755 aa	Known RBP	10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	KIFC1	Q9BW19	673 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	TSGA10	Q9BZW7	698 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	EPS8L2	Q9H6S3	715 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	IL1RAPL1	Q9NZN1	696 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	BFAR	Q9NZS9	450 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	SPATA7	Q9P0W8	599 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	ZNF282	Q9UDV7	671 aa	Predicted RBP	10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	OSGIN2	Q9Y236	505 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	CRYL1	Q9Y2S2	319 aa		10.04	□□□□□ -0.8
LSM4-205	ENST00000597776	MDC1	Q14676	2089 aa	Known RBP	10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	IGKV1-8	A0A0C4DH67	115 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776		H0YGG7	62 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	MAP2K7	O14733	419 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	LRRTM2	O43300	516 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	AVIL	O75366	819 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	MATN4	O95460	622 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	HP	P00738	406 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	ERG	P11308	486 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	CMPK1	P30085	196 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	NPY2R	P49146	381 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	CARS	P49589	748 aa	Known RBP	10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	ARF3	P61204	181 aa	Predicted RBP	10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	EEF1A2	Q05639	463 aa	Known RBP	10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	MFAP5	Q13361	173 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	TLR1	Q15399	786 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	TRIP13	Q15645	432 aa	Predicted RBP	10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	MUM1	Q2TAK8	710 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	HKDC1	Q2TB90	917 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	CROCC	Q5TZA2	2017 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	ATG9B	Q674R7	924 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	FAAH2	Q6GMR7	532 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	MRNIP	Q6NTE8	343 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	ISLR2	Q6UXK2	745 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	CSNK1A1L	Q8N752	337 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	AMER2	Q8N7J2	671 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	OR9A1P	Q8NGU1	263 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	MAGEC3	Q8TD91	643 aa		10.03	□□□□□ -0.8

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