RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 PRSS21Q9Y6M0 314 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 A3GALT2U3KPV4 340 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 U3KQV3 271 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 KCNE1BA0A087WTH5 132 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 KRBA1A5PL33 1030 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 SAGE2PA6NJ88 616 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 KPNA5O15131 536 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 GPR39O43194 453 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 CNOT3O75175 753 aaKnown RBP18.07■□□□□ 0.48
DDX39A-206ENST00000587730 BPIP17213 487 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 SDC1P18827 310 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 MZF1P28698 734 aaPredicted RBP18.07■□□□□ 0.48
DDX39A-206ENST00000587730 CD40LGP29965 261 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 ITGA1P56199 1179 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 AP1S2P56377 157 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 PHC1P78364 1004 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 PIGFQ07326 219 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 CSTF3Q12996 717 aaKnown RBP18.07■□□□□ 0.48
DDX39A-206ENST00000587730 GTF2H3Q13889 308 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 TAF12Q16514 161 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 CPSF6Q16630 551 aaKnown RBP eCLIP18.07■□□□□ 0.48
DDX39A-206ENST00000587730 CDKN3Q16667 212 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 ATXN7L2Q5T6C5 722 aaPredicted RBP18.07■□□□□ 0.48
DDX39A-206ENST00000587730 LACC1Q8IV20 430 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 MFSD4AQ8N468 514 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 CLDN19Q8N6F1 224 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 ZNF540Q8NDQ6 660 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 KRT84Q9NSB2 600 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 FCF1Q9Y324 198 aaKnown RBP18.07■□□□□ 0.48
DDX39A-206ENST00000587730 ARVCFO00192 962 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 XPNPEP2O43895 674 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 NUAK1O60285 661 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 FAM20BO75063 409 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 PRAMEF12O95522 483 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 IGSF6O95976 241 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 OR56A5P0C7T3 313 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 MYCLP1P12525 358 aaPredicted RBP18.06■□□□□ 0.48
DDX39A-206ENST00000587730 HMGA1P17096 107 aaKnown RBP18.06■□□□□ 0.48
DDX39A-206ENST00000587730 PTX3P26022 381 aaPredicted RBP18.06■□□□□ 0.48
DDX39A-206ENST00000587730 KDELR2P33947 212 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 FLT3LGP49771 235 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 DAPP51397 102 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 TEKQ02763 1124 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 KCNC3Q14003 757 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 CHRNA6Q15825 494 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 INAQ16352 499 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 ADPRMQ3LIE5 342 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 UBE2UQ5VVX9 321 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 FAHD1Q6P587 224 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 NCCRP1Q6ZVX7 275 aaPredicted RBP18.06■□□□□ 0.48
DDX39A-206ENST00000587730 CBLL1Q75N03 491 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 CLHC1Q8NHS4 586 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 COPS8Q99627 209 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 EPYCQ99645 322 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 LTB4R2Q9NPC1 389 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 ACOT13Q9NPJ3 140 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 GKN1Q9NS71 199 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 SLC6A13Q9NSD5 602 aa18.06■□□□□ 0.48
DDX39A-206ENST00000587730 SAMHD1Q9Y3Z3 626 aaKnown RBP18.06■□□□□ 0.48
DDX39A-206ENST00000587730 CLIC1O00299 241 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 GALTP07902 379 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 PSMB9P28065 219 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 CTGFP29279 349 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 SERPINA4P29622 427 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 HNF1BP35680 557 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 UGT2B10P36537 528 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 SLC6A12P48065 614 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 CLK3P49761 638 aaKnown RBP18.05■□□□□ 0.48
DDX39A-206ENST00000587730 VEPH1Q14D04 833 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 ZCCHC8Q6NZY4 707 aaKnown RBP18.05■□□□□ 0.48
DDX39A-206ENST00000587730 UBE2R2Q712K3 238 aaPredicted RBP18.05■□□□□ 0.48
DDX39A-206ENST00000587730 PLD3Q8IV08 490 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 OR8J2Q8NGG1 315 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 ALG14Q96F25 216 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 TSSK3Q96PN8 268 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 INPP5KQ9BT40 448 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 MAGEB17A8MXT2 336 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 MYO1GB0I1T2 1018 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 FPGTO14772 594 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 C9P02748 559 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 IRF1P10914 325 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 HSD3B1P14060 373 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 AMD1P17707 334 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 CYP2A7P20853 494 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 HSD3B2P26439 372 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 FMO3P31513 532 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 TMED10P49755 219 aaKnown RBP18.05■□□□□ 0.48
DDX39A-206ENST00000587730 PPP5CP53041 499 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 SIM2Q14190 667 aaPredicted RBP18.05■□□□□ 0.48
DDX39A-206ENST00000587730 PTPRRQ15256 657 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 CARD16Q5EG05 197 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 MLIPQ5VWP3 458 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 FRG2Q64ET8 278 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 TPGS2Q68CL5 300 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 PLEKHG7Q6ZR37 379 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 GALNT5Q7Z7M9 940 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 NPAS4Q8IUM7 802 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 ZZZ3Q8IYH5 903 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 FRG2BQ96QU4 278 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 PANX1Q96RD7 426 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms