RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 RNF11Q9Y3C5 154 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 GPR45Q9Y5Y3 372 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 HS3ST3A1Q9Y663 406 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 KCNE2Q9Y6J6 123 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 FREM2Q5SZK8 3169 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 KCNE1BA0A087WTH5 132 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 A0A088AWK7 358 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 FAM234BA2RU67 622 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 FPGTO14772 594 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 TNFRSF10CO14798 259 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 KHNYNO15037 678 aaKnown RBP10.07□□□□□ -0.8
LIG3-203ENST00000585370 LSM1O15116 133 aaKnown RBP10.07□□□□□ -0.8
LIG3-203ENST00000585370 KDM1AO60341 852 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 SLC22A3O75751 556 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 RSL1D1O76021 490 aaKnown RBP10.07□□□□□ -0.8
LIG3-203ENST00000585370 IGLV3-19P01714 112 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 PRPS2P11908 318 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 EPORP19235 508 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 IMPA1P29218 277 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 HNRNPH1P31943 449 aaKnown RBP10.07□□□□□ -0.8
LIG3-203ENST00000585370 HALP42357 657 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 DHPSP49366 369 aaPredicted RBP10.07□□□□□ -0.8
LIG3-203ENST00000585370 NUDT2P50583 147 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 KCNK10P57789 538 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 YPEL5P62699 121 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 CTBSQ01459 385 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 TBL3Q12788 808 aaKnown RBP10.07□□□□□ -0.8
LIG3-203ENST00000585370 CHIT1Q13231 466 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 LAPTM5Q13571 262 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 E2F2Q14209 437 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 NFE2L1Q14494 772 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 ABRAXAS2Q15018 415 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 NR6A1Q15406 480 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 AP5B1Q2VPB7 878 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 SPATS1Q496A3 300 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.07□□□□□ -0.8
LIG3-203ENST00000585370 CACHD1Q5VU97 1274 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 PRMT9Q6P2P2 845 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 DOK6Q6PKX4 331 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 KIAA1324Q6UXG2 1013 aaKnown RBP10.07□□□□□ -0.8
LIG3-203ENST00000585370 MBOAT1Q6ZNC8 495 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 CACUL1Q86Y37 369 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 DCUN1D3Q8IWE4 304 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 TBC1D21Q8IYX1 336 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 DEFB107AQ8IZN7 70 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 FBXW8Q8N3Y1 598 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 SFRP1Q8N474 314 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 FAM174AQ8TBP5 190 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 PIGKQ92643 395 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 TFGQ92734 400 aaPredicted RBP10.07□□□□□ -0.8
LIG3-203ENST00000585370 RCN3Q96D15 328 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 ERLEC1Q96DZ1 483 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 ZBTB18Q99592 522 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 HOPXQ9BPY8 73 aaPredicted RBP10.07□□□□□ -0.8
LIG3-203ENST00000585370 HAUS8Q9BT25 410 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 SGPP1Q9BX95 441 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 LGR4Q9BXB1 951 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 ZDHHC5Q9C0B5 715 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 ATG10Q9H0Y0 220 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 EHD1Q9H4M9 534 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 DCLRE1BQ9H816 532 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 TMEM74BQ9NUR3 256 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 C1orf109Q9NX04 203 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 CCDC167Q9P0B6 97 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 SPATA7Q9P0W8 599 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 FAM8A1Q9UBU6 413 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 TMED5Q9Y3A6 229 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 DYRK1BQ9Y463 629 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 CCL27Q9Y4X3 112 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 PCDHGA11Q9Y5H2 935 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 LRRK1Q38SD2 2015 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 TRPM6Q9BX84 2022 aa10.07□□□□□ -0.8
LIG3-203ENST00000585370 CACNA1GO43497 2377 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 TCRBV21S2A2A0A5A6 115 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 H0YIV9 168 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 SLC16A8O95907 504 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 CEACAM5P06731 702 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 SLC35G4P0C7Q5 338 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 SLC2A4P14672 509 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 NDUFV2P19404 249 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 IDSP22304 550 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 HNRNPA2B1P22626 353 aaKnown RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 ITPKAP23677 461 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 HTR1BP28222 390 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 AKT2P31751 481 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 IGFALSP35858 605 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 BDKRB1P46663 353 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 NOVA1P51513 510 aaKnown RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 TPMTP51580 245 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 CCR5P51681 352 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 CLCNKAP51800 687 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 FOXM1Q08050 763 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 CSTF3Q12996 717 aaKnown RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 PRKG2Q13237 762 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 LRP8Q14114 963 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 CPSF6Q16630 551 aaKnown RBP eCLIP10.06□□□□□ -0.8
LIG3-203ENST00000585370 HIST2H2ACQ16777 129 aaPredicted RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 ZXDCQ2QGD7 858 aaPredicted RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 PAGE2BQ5JRK9 111 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms