RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 CDH18Q13634 790 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 ZXDCQ2QGD7 858 aaPredicted RBP13.31□□□□□ -0.28
RNF43-205ENST00000581868 MACC1Q6ZN28 852 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 UBE2R2Q712K3 238 aaPredicted RBP13.31□□□□□ -0.28
RNF43-205ENST00000581868 AHSA2Q719I0 299 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 DSG4Q86SJ6 1040 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 APCDD1Q8J025 514 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 PCSK9Q8NBP7 692 aaKnown RBP13.31□□□□□ -0.28
RNF43-205ENST00000581868 OR6Q1Q8NGQ2 317 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 DYNC2LI1Q8TCX1 351 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 ABHD8Q96I13 439 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 PRM3Q9NNZ6 103 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 NMRK2Q9NPI5 230 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 ACOT13Q9NPJ3 140 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 KRT84Q9NSB2 600 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 SNX6Q9UNH7 406 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 ITPKAP23677 461 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 ACVR2AP27037 513 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 HOXA9P31269 272 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 KIR3DL1P43629 444 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 SMAD3P84022 425 aaKnown RBP13.31□□□□□ -0.28
RNF43-205ENST00000581868 KEAP1Q14145 624 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 SYT6Q5T7P8 510 aaPredicted RBP13.31□□□□□ -0.28
RNF43-205ENST00000581868 PLD3Q8IV08 490 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 NXPE1Q8N323 547 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 HPS1Q92902 700 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 LGALS12Q96DT0 336 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 TPD52L3Q96J77 140 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 HTATIP2Q9BUP3 242 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 REXO4Q9GZR2 422 aaKnown RBP13.31□□□□□ -0.28
RNF43-205ENST00000581868 RDH14Q9HBH5 336 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 PRDM8Q9NQV8 689 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 GIN1Q9NXP7 522 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 PCDHGA4Q9Y5G9 962 aa13.31□□□□□ -0.28
RNF43-205ENST00000581868 SEC24AO95486 1093 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 GALTP07902 379 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 CD36P16671 472 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 HMGA1P17096 107 aaKnown RBP13.3□□□□□ -0.28
RNF43-205ENST00000581868 HOXB9P17482 250 aaPredicted RBP13.3□□□□□ -0.28
RNF43-205ENST00000581868 FPR1P21462 350 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 KRT20P35900 424 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 ACLYP53396 1101 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 RPS3AP61247 264 aaKnown RBP13.3□□□□□ -0.28
RNF43-205ENST00000581868 AP1S1P61966 158 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 MAD2L1BPQ15013 274 aaPredicted RBP13.3□□□□□ -0.28
RNF43-205ENST00000581868 HIST2H2ACQ16777 129 aaPredicted RBP13.3□□□□□ -0.28
RNF43-205ENST00000581868 SYT16Q17RD7 645 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 INAVAQ3KP66 663 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 PDE12Q6L8Q7 609 aaKnown RBP13.3□□□□□ -0.28
RNF43-205ENST00000581868 RNF165Q6ZSG1 346 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 GPR26Q8NDV2 337 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 C2orf15Q8WU43 125 aaKnown RBP13.3□□□□□ -0.28
RNF43-205ENST00000581868 NELL1Q92832 810 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 HSH2DQ96JZ2 352 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 KLF16Q9BXK1 252 aaPredicted RBP13.3□□□□□ -0.28
RNF43-205ENST00000581868 DNMT3BQ9UBC3 853 aaKnown RBP13.3□□□□□ -0.28
RNF43-205ENST00000581868 LRFN2Q9ULH4 789 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 PIKFYVEQ9Y2I7 2098 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 TRBV5-4A0A0C4DH59 114 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 KCNK5O95279 499 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 CCR7P32248 378 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 KDELR2P33947 212 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 SPAM1P38567 509 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 TUFMP49411 452 aaKnown RBP13.3□□□□□ -0.28
RNF43-205ENST00000581868 FCGRTP55899 365 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 CREMQ03060 361 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 SF1Q15637 639 aaKnown RBP13.3□□□□□ -0.28
RNF43-205ENST00000581868 VMACQ2NL98 169 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 PTCHD3Q3KNS1 767 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 CATSPEREQ5SY80 951 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 SAPCD2Q86UD0 394 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 CCDC71Q8IV32 467 aaPredicted RBP13.3□□□□□ -0.28
RNF43-205ENST00000581868 SVOPQ8N4V2 548 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 DBF4BQ8NFT6 615 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 PSMA8Q8TAA3 256 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
RNF43-205ENST00000581868 CMTM7Q96FZ5 175 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 HEPHQ9BQS7 1158 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 GABARAPL1Q9H0R8 117 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 SIRT5Q9NXA8 310 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 KCTD5Q9NXV2 234 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.3□□□□□ -0.28
RNF43-205ENST00000581868 SLC22A14Q9Y267 594 aa13.3□□□□□ -0.28
RNF43-205ENST00000581868 AQP9O43315 295 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 CNOT3O75175 753 aaKnown RBP13.29□□□□□ -0.28
RNF43-205ENST00000581868 SH3BGRLO75368 114 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 COL6A1P12109 1028 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 TGM1P22735 817 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 RPP38P78345 283 aaKnown RBP13.29□□□□□ -0.28
RNF43-205ENST00000581868 ZXDBP98169 803 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 KIAA1614Q5VZ46 1190 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 NOXRED1Q6NXP6 359 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 NEK5Q6P3R8 708 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 Q6ZPB1 254 aaPredicted RBP13.29□□□□□ -0.28
RNF43-205ENST00000581868 RFLNAQ6ZTI6 216 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 SLC22A16Q86VW1 577 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 ZSWIM9Q86XI8 627 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 SYT12Q8IV01 421 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 ZZZ3Q8IYH5 903 aa13.29□□□□□ -0.28
RNF43-205ENST00000581868 CLECL1Q8IZS7 167 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms