RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 ATG10Q9H0Y0 220 aa13.37□□□□□ -0.27
LINC01543-201ENST00000578367 MRPS30Q9NP92 439 aaKnown RBP13.37□□□□□ -0.27
LINC01543-201ENST00000578367 TMEM184CQ9NVA4 438 aa13.37□□□□□ -0.27
LINC01543-201ENST00000578367 CPSF2Q9P2I0 782 aaKnown RBP13.37□□□□□ -0.27
LINC01543-201ENST00000578367 OPTCQ9UBM4 332 aa13.37□□□□□ -0.27
LINC01543-201ENST00000578367 DYRK1BQ9Y463 629 aa13.37□□□□□ -0.27
LINC01543-201ENST00000578367 A8MT66 165 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 FOXO6A8MYZ6 492 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 G3V2L1 256 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 GIPC1O14908 333 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 BIRC5O15392 142 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 DLX3O60479 287 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 UGDHO60701 494 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 RASSF9O75901 435 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 HOXB3P14651 431 aaPredicted RBP13.36□□□□□ -0.27
LINC01543-201ENST00000578367 EPB42P16452 691 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 NELFEP18615 380 aaKnown RBP13.36□□□□□ -0.27
LINC01543-201ENST00000578367 CXCR2P25025 360 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 GSTM2P28161 218 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 SERPINB5P36952 375 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 MLLT3P42568 568 aaPredicted RBP13.36□□□□□ -0.27
LINC01543-201ENST00000578367 CASP2P42575 452 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 ETV4P43268 484 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 HERVK_113P63132 956 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 HSD11B2P80365 405 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 CDC16Q13042 620 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 E2F2Q14209 437 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 TBCCQ15814 346 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 PDK4Q16654 411 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 ZXDCQ2QGD7 858 aaPredicted RBP13.36□□□□□ -0.27
LINC01543-201ENST00000578367 TMTC4Q5T4D3 741 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 HES3Q5TGS1 186 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 C16orf46Q6P387 395 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 SUSD1Q6UWL2 747 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 TMPRSS7Q7RTY8 843 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 D2HGDHQ8N465 521 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 TBC1D19Q8N5T2 526 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 PTGR2Q8N8N7 351 aaPredicted RBP13.36□□□□□ -0.27
LINC01543-201ENST00000578367 CCDC63Q8NA47 563 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 AGBL5Q8NDL9 886 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 OR8K5Q8NH50 307 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 EXT2Q93063 718 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 ARL8AQ96BM9 186 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 THAP11Q96EK4 314 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 L3HYPDHQ96EM0 354 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 MED8Q96G25 268 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 SEC16BQ96JE7 1060 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 FAM111AQ96PZ2 611 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 TRAPPC9Q96Q05 1148 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 MAP3K3Q99759 626 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 CMKLR1Q99788 373 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 TRMOQ9BU70 441 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 SARGQ9BW04 601 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 ERVK-6Q9BXR3 956 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 PELI2Q9HAT8 420 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 ENAMQ9NRM1 1142 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 OXSMQ9NWU1 459 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 CIDEBQ9UHD4 219 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 TAC3Q9UHF0 121 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 ATXN7L1Q9ULK2 861 aaPredicted RBP13.36□□□□□ -0.27
LINC01543-201ENST00000578367 SLC22A14Q9Y267 594 aa13.36□□□□□ -0.27
LINC01543-201ENST00000578367 DCDC2BA2VCK2 349 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 OR2A25A4D2G3 310 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 CLGNO14967 610 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 H2AFYO75367 372 aaKnown RBP13.35□□□□□ -0.27
LINC01543-201ENST00000578367 SPAG7O75391 227 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 WDR47O94967 919 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 SNUPNO95149 360 aaKnown RBP13.35□□□□□ -0.27
LINC01543-201ENST00000578367 MLYCDO95822 493 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 RPS17P08708 135 aaKnown RBP13.35□□□□□ -0.27
LINC01543-201ENST00000578367 DHRS4L1P0CG22 281 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 JUPP14923 745 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 EZRP15311 586 aaKnown RBP13.35□□□□□ -0.27
LINC01543-201ENST00000578367 CSTF2P33240 577 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC01543-201ENST00000578367 GRK3P35626 688 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 GRIA3P42263 894 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 HSPA7P48741 367 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 ARL4DP49703 201 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 PDX1P52945 283 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 GFERP55789 205 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 ACY1Q03154 408 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 LAPTM5Q13571 262 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 ZC3H12BQ5HYM0 836 aaKnown RBP13.35□□□□□ -0.27
LINC01543-201ENST00000578367 C10orf62Q5T681 223 aaPredicted RBP13.35□□□□□ -0.27
LINC01543-201ENST00000578367 LIPMQ5VYY2 423 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 ZNF425Q6IV72 752 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 FIGLAQ6QHK4 219 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 FAM92BQ6ZTR7 304 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 TMPRSS9Q7Z410 1059 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 CHCHD4Q8N4Q1 142 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 C19orf47Q8N9M1 422 aaKnown RBP13.35□□□□□ -0.27
LINC01543-201ENST00000578367 PPFIBP2Q8ND30 876 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 ARMC2Q8NEN0 867 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 OR4K1Q8NGD4 311 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 SLC5A11Q8WWX8 675 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 PHF21BQ96EK2 531 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 WDR34Q96EX3 536 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 CCDC74BQ96LY2 380 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 OR4K3Q96R72 315 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 PLCD4Q9BRC7 762 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms