RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 SLC25A23Q9BV35 468 aa8.9□□□□□ -0.98
NPLOC4-210ENST00000572824 SYNPO2LQ9H987 977 aa8.9□□□□□ -0.98
NPLOC4-210ENST00000572824 ARNT2Q9HBZ2 717 aa8.9□□□□□ -0.98
NPLOC4-210ENST00000572824 SLC22A11Q9NSA0 550 aa8.9□□□□□ -0.98
NPLOC4-210ENST00000572824 MARCH4Q9P2E8 410 aaPredicted RBP8.9□□□□□ -0.98
NPLOC4-210ENST00000572824 TDRKHQ9Y2W6 561 aaKnown RBP8.9□□□□□ -0.98
NPLOC4-210ENST00000572824 CSAG2Q9Y5P2 127 aa8.9□□□□□ -0.98
NPLOC4-210ENST00000572824 ITPR2Q14571 2701 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 A1L4Q6 167 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 KCNJ13O60928 360 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 KLF7O75840 302 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 TMEM63AO94886 807 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 MED26O95402 600 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 CRTAMO95727 393 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 AP2A1O95782 977 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 CYP2A7P20853 494 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 MCM3P25205 808 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 MSNP26038 577 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 PSMB5P28074 263 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 ACADLP28330 430 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 PGDP52209 483 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 CRADDP78560 199 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 GRB7Q14451 532 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 NCF4Q15080 339 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 IZUMO3Q5VZ72 239 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 KLHL35Q6PF15 583 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 FAM214BQ7L5A3 538 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 MRGPREQ86SM8 312 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 AMIGO1Q86WK6 493 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 ZNF655Q8N720 491 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 C19orf47Q8N9M1 422 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 LINC01555Q8NAE3 123 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 DNAJB8Q8NHS0 232 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 CPT1CQ8TCG5 803 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 C1orf54Q8WWF1 131 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 ELMO1Q92556 727 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 TFGQ92734 400 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 ULK4Q96C45 1275 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 FCRL4Q96PJ5 515 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 PANX2Q96RD6 677 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 MENTQ9BUN1 341 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 MLXIPLQ9NP71 852 aa8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 STOX2Q9P2F5 926 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 AAR2Q9Y312 384 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.89□□□□□ -0.99
NPLOC4-210ENST00000572824 SCN2AQ99250 2005 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 SLC5A10A0PJK1 596 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 MROH6A6NGR9 719 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 H7C0S8 307 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 CEACAM4O75871 244 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 GOT2P00505 430 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 MT-ND3P03897 115 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 UMODP07911 640 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 CHRM5P08912 532 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 MAGP20916 626 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 CCR7P32248 378 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 GRIA3P42263 894 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 BDKRB1P46663 353 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 TERF1P54274 439 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 RPS15P62841 145 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 CACNG1Q06432 222 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 PRKAA1Q13131 559 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 SNX1Q13596 522 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 PRPSAP1Q14558 356 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 OASLQ15646 514 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 SKOR2Q2VWA4 1001 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 TMTC4Q5T4D3 741 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 JMJD6Q6NYC1 403 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 SHISA6Q6ZSJ9 500 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 PEX26Q7Z412 305 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 PPP1R32Q7Z5V6 425 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 CDH24Q86UP0 819 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 FAM26EQ8N5C1 309 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 SPC24Q8NBT2 197 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 CPT1BQ92523 772 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 HDAC10Q969S8 669 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 FAM136AQ96C01 138 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 TCTN2Q96GX1 697 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 GBP5Q96PP8 586 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 GPR87Q9BY21 358 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 TFB2MQ9H5Q4 396 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 LRRC40Q9H9A6 602 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 ACSS2Q9NR19 701 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 ASF1AQ9Y294 204 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 NTNG1Q9Y2I2 539 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 NFS1Q9Y697 457 aa8.88□□□□□ -0.99
NPLOC4-210ENST00000572824 BTNL10A8MVZ5 291 aa8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 TCP11X1B4DZS4 312 aa8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 GOLGA8KD6RF30 607 aa8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 E7EQ34 232 aa8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 GOLGA8TH3BQL2 631 aa8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 IFRD1O00458 451 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 FFAR3O14843 346 aa8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 GPR42O15529 346 aa8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 STK10O94804 968 aaKnown RBP8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 UBOX5O94941 541 aa8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 TJP3O95049 919 aa8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 IFNB1P01574 187 aa8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 RALBP11234 206 aa8.87□□□□□ -0.99
NPLOC4-210ENST00000572824 NDUFS1P28331 727 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms