RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 EFNA1P20827 205 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 PRPS1L1P21108 318 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 ACRV1P26436 265 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 RPIAP49247 311 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 HNRNPFP52597 415 aaKnown RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 RPP38P78345 283 aaKnown RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 ATXN7L2Q5T6C5 722 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 GPRC6AQ5T6X5 926 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 ZNF783Q6ZMS7 281 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 MACC1Q6ZN28 852 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 USP43Q70EL4 1123 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 EIF3MQ7L2H7 374 aaKnown RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 SYT12Q8IV01 421 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 CHPFQ8IZ52 775 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 POLE4Q9NR33 117 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 SACM1LQ9NTJ5 587 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 THG1LQ9NWX6 298 aaKnown RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 THUMPD1Q9NXG2 353 aaKnown RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 GPRC5BQ9NZH0 403 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 LHX3Q9UBR4 397 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 PRSS21Q9Y6M0 314 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 OR2A25A4D2G3 310 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 GJB5O95377 273 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 CPSF4O95639 269 aaKnown RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 LCKP06239 509 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 BCL2L1Q07817 233 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 NPRL3Q12980 569 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 SMN1Q16637 294 aaKnown RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 CDC26Q8NHZ8 85 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 SLC35B4Q969S0 331 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 MAGEB10Q96LZ2 347 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 BARD1Q99728 777 aaKnown RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 TTLL2Q9BWV7 592 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 GPR62Q9BZJ7 368 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 SLIRPQ9GZT3 109 aaKnown RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 ADPRHL2Q9NX46 363 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 TRPM5Q9NZQ8 1165 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 OSGIN1Q9UJX0 560 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 FCF1Q9Y324 198 aaKnown RBP10.46□□□□□ -0.73
CCDC40-207ENST00000572253 PMF1-BGLAPU3KQ54 211 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.46□□□□□ -0.74
CCDC40-207ENST00000572253 ASNA1O43681 348 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 CELF2O95319 508 aaKnown RBP10.46□□□□□ -0.74
CCDC40-207ENST00000572253 SDC1P18827 310 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 ACVR2AP27037 513 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 CD6P30203 668 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 SPAM1P38567 509 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 EIF2DP41214 584 aaKnown RBP10.46□□□□□ -0.74
CCDC40-207ENST00000572253 CDKN2CP42773 168 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 CTSKP43235 329 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 DEFA1P59665 94 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 DEFA3P59666 94 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 CDC20Q12834 499 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 CSTF3Q12996 717 aaKnown RBP10.46□□□□□ -0.74
CCDC40-207ENST00000572253 FAM26DQ5JW98 314 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 UBE2UQ5VVX9 321 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 NEK5Q6P3R8 708 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 MBOAT1Q6ZNC8 495 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 DSG4Q86SJ6 1040 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 HTRA1Q92743 480 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 PROX1Q92786 737 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 RPL3LQ92901 407 aaKnown RBP10.46□□□□□ -0.74
CCDC40-207ENST00000572253 TPD52L3Q96J77 140 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 RNF6Q9Y252 685 aa10.46□□□□□ -0.74
CCDC40-207ENST00000572253 MAGEB17A8MXT2 336 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 SCAMP3O14828 347 aaKnown RBP10.45□□□□□ -0.74
CCDC40-207ENST00000572253 AREL1O15033 823 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 SNPHO15079 494 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 MED26O95402 600 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 DBTP11182 482 aaKnown RBP10.45□□□□□ -0.74
CCDC40-207ENST00000572253 PABPC1P11940 636 aaKnown RBP10.45□□□□□ -0.74
CCDC40-207ENST00000572253 COX7A2P14406 83 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 UGT2B10P36537 528 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 ITGA1P56199 1179 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 CAMK2GQ13555 558 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-207ENST00000572253 GBX1Q14549 363 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 SYT16Q17RD7 645 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 COLEC12Q5KU26 742 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 ANKS3Q6ZW76 656 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 STARD8Q92502 1023 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 TM6SF2Q9BZW4 377 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 CRISPLD1Q9H336 500 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 CWH43Q9H720 699 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.45□□□□□ -0.74
CCDC40-207ENST00000572253 MICAL3Q7RTP6 2002 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 AXIN1O15169 862 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 FZD6O60353 706 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 PRMT3O60678 531 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 STC2O76061 302 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 APOA1P02647 267 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 GSTT2P0CG29 244 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 GSTT2BP0CG30 244 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 SGSHP51688 502 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 NEK2P51955 445 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 CHRNA6Q15825 494 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 KCNA10Q16322 511 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 TIGD6Q17RP2 521 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 GGTA1PQ4G0N0 100 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 UBE2R2Q712K3 238 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-207ENST00000572253 VTCN1Q7Z7D3 282 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms