RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 GDAP1Q8TB36 358 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 M1APQ8TC57 530 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 ZFAND2BQ8WV99 257 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 C1orf159Q96HA4 380 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 RBM41Q96IZ5 413 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 XKR8Q9H6D3 395 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 MVB12BQ9H7P6 319 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 PCDH9Q9HC56 1237 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 MMP25Q9NPA2 562 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 NLRC4Q9NPP4 1024 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 JKAMPQ9P055 326 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 C6orf203Q9P0P8 240 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 PCDHGB3Q9Y5G1 929 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 GRID2IPA4D2P6 1211 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 OR2AG2A6NM03 316 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 EEF2KO00418 725 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 CTIFO43310 598 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 GPRIN2O60269 458 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 SHOX2O60902 331 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 CYC1P08574 325 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 CHRM5P08912 532 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 C8orf89P0DMQ9 161 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 RARAP10276 462 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 ITGA2P17301 1181 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 FBLP22087 321 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 PBLDP30039 288 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 TRHRP34981 398 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 TIMP3P35625 211 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 CD86P42081 329 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 ITGA8P53708 1063 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 CASP9P55211 416 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 CDH6P55285 790 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 VLDLRP98155 873 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 OCRLQ01968 901 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 FOXO1Q12778 655 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 EXT1Q16394 746 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 TMEM249Q2WGJ8 235 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 FBLN7Q53RD9 439 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 LDLRAP1Q5SW96 308 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 WLSQ5T9L3 541 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 RESP18Q5W5W9 173 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 SCYL2Q6P3W7 929 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 GJB7Q6PEY0 223 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 TREML4Q6UXN2 200 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 UNC5AQ6ZN44 842 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 RGS9BPQ6ZS82 235 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 TRILQ7L0X0 811 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 CPEB2Q7Z5Q1 589 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 DAAM2Q86T65 1068 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 DTX3LQ8TDB6 740 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 NSMCE1Q8WV22 266 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 KIAA1191Q96A73 305 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 SARAFQ96BY9 339 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 TMX3Q96JJ7 454 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 LINC00615Q96LM1 132 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 TSG101Q99816 390 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 POLR1EQ9GZS1 481 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 C12orf65Q9H3J6 166 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 CDCP1Q9H5V8 836 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 ASB8Q9H765 288 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 SPHK1Q9NYA1 384 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 TRPC4Q9UBN4 977 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 ACAD8Q9UKU7 415 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 ICKQ9UPZ9 632 aa6.18□□□□□ -1.42
HERPUD1-217ENST00000569429 RYR1P21817 5038 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 A0A096LNT2 108 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 IGHV3-20A0A0C4DH32 117 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 TMEM89A2RUT3 159 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 TMPRSS2O15393 492 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 PRPF4O43172 522 aaKnown RBP eCLIP6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 PRPSAP2O60256 369 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 SUSD5O60279 629 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 LMX1BO60663 402 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 SRPX2O60687 465 aaPredicted RBP6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 YEATS4O95619 227 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 LSM8O95777 96 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 POLBP06746 335 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 MAGP20916 626 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 TPP2P29144 1249 aaPredicted RBP6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 SHMT2P34897 504 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 CD151P48509 253 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 HLCSP50747 726 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 ZNF136P52737 540 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 TAS2R50P59544 299 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 PPIAP62937 165 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 DPYSQ14117 519 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 LONRF2Q1L5Z9 754 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 CCDC38Q502W7 563 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 RFX8Q6ZV50 586 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 ABHD13Q7L211 337 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 BTLAQ7Z6A9 289 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 RPS19BP1Q86WX3 136 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 ARIH2OSQ8N7S6 290 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 DDHD1Q8NEL9 900 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 TNIP2Q8NFZ5 429 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 METTL21AQ8WXB1 218 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 NTNG2Q96CW9 530 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 MVB12AQ96EY5 273 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 SELENOSQ9BQE4 189 aa6.17□□□□□ -1.42
HERPUD1-217ENST00000569429 CNPPD1Q9BV87 410 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms