RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 ZFYVE21Q9BQ24 234 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 RUVBL2Q9Y230 463 aaKnown RBP13.05□□□□□ -0.32
CNOT1-215ENST00000569020 DRG1Q9Y295 367 aaKnown RBP13.05□□□□□ -0.32
CNOT1-215ENST00000569020 KLK4Q9Y5K2 254 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 RP1L1Q8IWN7 2480 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-215ENST00000569020 LOC105369274A0A096LPK9 316 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 LOC102723532A0A0G2JNH3 316 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 A0A1W2PPV9 198 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 GOLGA6L6A8MZA4 724 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 H3BMM5 538 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 MAP2K7O14733 419 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 VPS26AO75436 327 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 VAPBO95292 243 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 HPP00738 406 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 ZGLP1P0C6A0 271 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 COL8A1P27658 744 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 TLR1Q15399 786 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 ANKRD20A4Q4UJ75 823 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 CTSL3PQ5NE16 218 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 RNF187Q5TA31 235 aaPredicted RBP13.04□□□□□ -0.32
CNOT1-215ENST00000569020 MEI1Q5TIA1 1274 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 B3GNTL1Q67FW5 361 aaPredicted RBP13.04□□□□□ -0.32
CNOT1-215ENST00000569020 DRICH1Q6PGQ1 229 aaPredicted RBP13.04□□□□□ -0.32
CNOT1-215ENST00000569020 ISLR2Q6UXK2 745 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 OR4N4Q8N0Y3 316 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 MAIP1Q8WWC4 291 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 MFSD3Q96ES6 412 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 TSR3Q9UJK0 312 aaKnown RBP13.04□□□□□ -0.32
CNOT1-215ENST00000569020 CDC14AQ9UNH5 594 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 ZKSCAN5Q9Y2L8 839 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 HEATR5BQ9P2D3 2071 aa13.04□□□□□ -0.32
CNOT1-215ENST00000569020 UTP20O75691 2785 aaKnown RBP13.03□□□□□ -0.32
CNOT1-215ENST00000569020 CACNA1DQ01668 2161 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 OR2A25A4D2G3 310 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 KRT87PA6NCN2 255 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 PRPF4O43172 522 aaKnown RBP eCLIP13.03□□□□□ -0.325e-14■■■■■ 28.4
CNOT1-215ENST00000569020 NIPSNAP2O75323 286 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 MATN4O95460 622 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 ESR1P03372 595 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 ACPPP15309 386 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 CHRM3P20309 590 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 FBLP22087 321 aaKnown RBP13.03□□□□□ -0.32
CNOT1-215ENST00000569020 MGAT1P26572 445 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 ATP5DP30049 168 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 FMO4P31512 558 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 DCTP40126 519 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 MFAP5Q13361 173 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 FASTKQ14296 549 aaKnown RBP13.03□□□□□ -0.32
CNOT1-215ENST00000569020 ZNF787Q6DD87 383 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 LRRC8BQ6P9F7 803 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 FAM180AQ6UWF9 173 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 PRSS58Q8IYP2 241 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 DTWD1Q8N5C7 304 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 OR9A1PQ8NGU1 263 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 GRHL3Q8TE85 626 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 FAR1Q8WVX9 515 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 CABS1Q96KC9 395 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 BIRC8Q96P09 236 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 LMF1Q96S06 567 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 DPH7Q9BTV6 452 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 KIFC1Q9BW19 673 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 ACAT2Q9BWD1 397 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 ZNF160Q9HCG1 818 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 MRPS30Q9NP92 439 aaKnown RBP13.03□□□□□ -0.32
CNOT1-215ENST00000569020 SYBUQ9NX95 663 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 UTP6Q9NYH9 597 aaKnown RBP13.03□□□□□ -0.32
CNOT1-215ENST00000569020 C3orf18Q9UK00 162 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 CRYL1Q9Y2S2 319 aa13.03□□□□□ -0.32
CNOT1-215ENST00000569020 SPTAN1Q13813 2472 aaKnown RBP13.03□□□□□ -0.32
CNOT1-215ENST00000569020 CPAMD8Q8IZJ3 1885 aa13.02□□□□□ -0.32
CNOT1-215ENST00000569020 IGLV3-12A0A075B6K2 115 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 NSG1A0A0A6YYJ2 146 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 GOLGA8KD6RF30 607 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 E5RI56 91 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 GOLGA8TH3BQL2 631 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 NRP2O60462 931 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 PHF2O75151 1096 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 MED26O95402 600 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 EDN3P14138 238 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 PAMP19021 973 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 OGNP20774 298 aaKnown RBP13.02□□□□□ -0.33
CNOT1-215ENST00000569020 CXCR2P25025 360 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 ARNTP27540 789 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 RPA3P35244 121 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-215ENST00000569020 EMP3P54852 163 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 ADARP55265 1226 aaKnown RBP13.02□□□□□ -0.33
CNOT1-215ENST00000569020 PER3P56645 1201 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 CDK16Q00536 496 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 Q0VFX4 171 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 TSTA3Q13630 321 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-215ENST00000569020 SIX1Q15475 284 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-215ENST00000569020 TYSND1Q2T9J0 566 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 VWA2Q5GFL6 755 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 RPUSD3Q6P087 351 aaKnown RBP13.02□□□□□ -0.33
CNOT1-215ENST00000569020 FBXO42Q6P3S6 717 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 SUSD1Q6UWL2 747 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 CES3Q6UWW8 571 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 LINC00696Q6ZRV3 163 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 KBTBD2Q8IY47 623 aa13.02□□□□□ -0.33
CNOT1-215ENST00000569020 SMPDL3AQ92484 453 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms