RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 NDNQ99608 321 aa11.29□□□□□ -0.6
SNAPC5-208ENST00000568875 SPATA16Q9BXB7 569 aa11.29□□□□□ -0.6
SNAPC5-208ENST00000568875 ABCG4Q9H172 646 aa11.29□□□□□ -0.6
SNAPC5-208ENST00000568875 TFB2MQ9H5Q4 396 aaKnown RBP11.29□□□□□ -0.6
SNAPC5-208ENST00000568875 CARS2Q9HA77 564 aaKnown RBP11.29□□□□□ -0.6
SNAPC5-208ENST00000568875 SPAG4Q9NPE6 437 aa11.29□□□□□ -0.6
SNAPC5-208ENST00000568875 INTS10Q9NVR2 710 aaKnown RBP11.29□□□□□ -0.6
SNAPC5-208ENST00000568875 PKD2L2Q9NZM6 624 aa11.29□□□□□ -0.6
SNAPC5-208ENST00000568875 GULP1Q9UBP9 304 aa11.29□□□□□ -0.6
SNAPC5-208ENST00000568875 TMEM98Q9Y2Y6 226 aa11.29□□□□□ -0.6
SNAPC5-208ENST00000568875 BPTFQ12830 3046 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 FADS2P1A8MWK0 482 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 TMEM233B4DJY2 109 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 CD1EP15812 388 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 PGGT1BP53609 377 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 MRPS22P82650 360 aaKnown RBP11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 COQ5Q5HYK3 327 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 SAMD4BQ5PRF9 694 aaKnown RBP11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 PCYOX1LQ8NBM8 494 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 GPR26Q8NDV2 337 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 TSPEARQ8WU66 669 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 ANKRD49Q8WVL7 239 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 ZCCHC14Q8WYQ9 949 aaKnown RBP11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 NAT6Q93015 286 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 TCF12Q99081 682 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 SH3GL3Q99963 347 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 CCDC86Q9H6F5 360 aaKnown RBP11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 SYTL2Q9HCH5 934 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 TMEM181Q9P2C4 612 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 CD300AQ9UGN4 299 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 G3BP2Q9UN86 482 aaKnown RBP11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 SPO11Q9Y5K1 396 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 COMMD3-BMI1R4GMX3 469 aa11.28□□□□□ -0.6
SNAPC5-208ENST00000568875 CASC3O15234 703 aaKnown RBP11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 INPP4BO15327 924 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 CD3EAPO15446 510 aaKnown RBP11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 NOBOXO60393 691 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 NRP2O60462 931 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 VPS4BO75351 444 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 CD1DP15813 335 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 CD9P21926 228 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 GNPDA1P46926 289 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 MRPL19P49406 292 aaKnown RBP11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 CDKN2DP55273 166 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 PKNOX1P55347 436 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 DCDC1P59894 354 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 STX1BP61266 288 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 CYP4F3Q08477 520 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 RTP5Q14D33 572 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 TLR1Q15399 786 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 ADRM1Q16186 407 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 TYSND1Q2T9J0 566 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 UGT3A2Q3SY77 523 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 AGKQ53H12 422 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 PYCR3Q53H96 274 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 UNC50Q53HI1 259 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 REP15Q6BDI9 236 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 PRMT9Q6P2P2 845 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 TRIM74Q86UV6 250 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 C17orf82Q86X59 251 aaPredicted RBP11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 PROSER1Q86XN7 944 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 SFTPA2Q8IWL1 248 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 TMEM102Q8N9M5 508 aaPredicted RBP11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 HMGCLL1Q8TB92 370 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 NPAS2Q99743 824 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 HOPXQ9BPY8 73 aaPredicted RBP11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 EFHD1Q9BUP0 239 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 GPR63Q9BZJ6 419 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 NRSN2Q9GZP1 204 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 ZNF696Q9H7X3 374 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 ACSS2Q9NR19 701 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 TMEM45AQ9NWC5 275 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 NFKBIL1Q9UBC1 381 aaPredicted RBP11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 CROTQ9UKG9 612 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 TMCO1Q9UM00 188 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 ZNF711Q9Y462 761 aa11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 OAS3Q9Y6K5 1087 aaKnown RBP11.27□□□□□ -0.61
SNAPC5-208ENST00000568875 C15orf38-AP3S2A0A0A6YYH1 394 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 TCRBV3S1A0A5B6 114 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 ENO4A6NNW6 628 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 SUPT7LO94864 414 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 TNFAIP8O95379 198 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 BPIP17213 487 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 AK4P27144 223 aaPredicted RBP11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 SLC7A1P30825 629 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 HMGCLP35914 325 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 RPL5P46777 297 aaKnown RBP11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 ARSDP51689 593 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 ATP6V0D1P61421 351 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 CTBSQ01459 385 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 ILF3Q12906 894 aaKnown RBP eCLIP11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 DYNC1I2Q13409 638 aaKnown RBP11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 PDAP1Q13442 181 aaKnown RBP11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 DOK6Q6PKX4 331 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 TMEM207Q6UWW9 146 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 GK5Q6ZS86 529 aa11.26□□□□□ -0.61
SNAPC5-208ENST00000568875 ARPINQ7Z6K5 226 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms