RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 TUBB3Q13509 450 aa18.1■□□□□ 0.49
COMMD4-213ENST00000565834 TBCCQ15814 346 aa18.1■□□□□ 0.49
COMMD4-213ENST00000565834 DEFB133Q30KQ1 61 aa18.1■□□□□ 0.49
COMMD4-213ENST00000565834 SLCO4C1Q6ZQN7 724 aa18.1■□□□□ 0.49
COMMD4-213ENST00000565834 ALYREFQ86V81 257 aaKnown RBP18.1■□□□□ 0.49
COMMD4-213ENST00000565834 C17orf64Q86WR6 236 aa18.1■□□□□ 0.49
COMMD4-213ENST00000565834 PTCD3Q96EY7 689 aaKnown RBP18.1■□□□□ 0.49
COMMD4-213ENST00000565834 CCT7Q99832 543 aa18.1■□□□□ 0.49
COMMD4-213ENST00000565834 CCDC28BQ9BUN5 200 aa18.1■□□□□ 0.49
COMMD4-213ENST00000565834 SNX6Q9UNH7 406 aa18.1■□□□□ 0.49
COMMD4-213ENST00000565834 PTGDR2Q9Y5Y4 395 aa18.1■□□□□ 0.49
COMMD4-213ENST00000565834 CSNK1G3Q9Y6M4 447 aa18.1■□□□□ 0.49
COMMD4-213ENST00000565834 ADAMTS9Q9P2N4 1935 aa18.1■□□□□ 0.49
COMMD4-213ENST00000565834 HEATR5BQ9P2D3 2071 aa18.1■□□□□ 0.49
COMMD4-213ENST00000565834 MANBAO00462 879 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 KRT6AP02538 564 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 KRT6BP04259 564 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 LINC00032P0C843 101 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 PSMB5P28074 263 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 CASP2P42575 452 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 KRT6CP48668 564 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 HTR6P50406 440 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 GRIK2Q13002 908 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 ZRSR2Q15696 482 aaKnown RBP18.09■□□□□ 0.49
COMMD4-213ENST00000565834 LSM12Q3MHD2 195 aaKnown RBP18.09■□□□□ 0.49
COMMD4-213ENST00000565834 ATG9BQ674R7 924 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 NXNQ6DKJ4 435 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 GRHL2Q6ISB3 625 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 FOXR1Q6PIV2 292 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 IL27RAQ6UWB1 636 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 NXPE4Q6UWF7 544 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 MTDHQ86UE4 582 aaKnown RBP18.09■□□□□ 0.49
COMMD4-213ENST00000565834 PRR11Q96HE9 360 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-213ENST00000565834 LRRC37BQ96QE4 947 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 EHD1Q9H4M9 534 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 PCDHB11Q9Y5F2 797 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 SNRNP200O75643 2136 aaKnown RBP18.09■□□□□ 0.49
COMMD4-213ENST00000565834 ZNF318Q5VUA4 2279 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 ULK1O75385 1050 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 CHRM5P08912 532 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-213ENST00000565834 C1GALT1C1LP0DN25 315 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 CDH1P12830 882 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 CD22P20273 847 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 VARSP26640 1264 aaKnown RBP18.09■□□□□ 0.49
COMMD4-213ENST00000565834 NUBP1P53384 320 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 MAZP56270 477 aaKnown RBP18.09■□□□□ 0.49
COMMD4-213ENST00000565834 BNIP3Q12983 259 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 E2F2Q14209 437 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 LPAL2Q16609 132 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 ZSCAN26Q16670 478 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 ZNF423Q2M1K9 1284 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 CATSPEREQ5SY80 951 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 SCIMPQ6UWF3 145 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 TRPM8Q7Z2W7 1104 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 CEP70Q8NHQ1 597 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 ACTRT2Q8TDY3 377 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 WDR34Q96EX3 536 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 C3orf30Q96M34 536 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 EFCAB11Q9BUY7 163 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 ELOVL6Q9H5J4 265 aa18.09■□□□□ 0.49
COMMD4-213ENST00000565834 ATP6AP2A0A1C7CYW4 349 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 PRR33A8MZF0 331 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 E9PBE3 544 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 NOBOXO60393 691 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 KLHL41O60662 606 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 VPS4BO75351 444 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 ATP6AP2O75787 350 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 IFT88Q13099 833 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 ABRAXAS2Q15018 415 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 SHBQ15464 509 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 XKR7Q5GH72 579 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 PAGE2BQ5JRK9 111 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 ICE2Q659A1 982 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 RNF165Q6ZSG1 346 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 TMEM26Q6ZUK4 368 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 ARL14Q8N4G2 192 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 OR2A1Q8NGT9 310 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 CAPN10Q9HC96 672 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 SPHK1Q9NYA1 384 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 ZNF490Q9ULM2 529 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-213ENST00000565834 USP34Q70CQ2 3546 aa18.08■□□□□ 0.48
COMMD4-213ENST00000565834 GOLGA4Q13439 2230 aaKnown RBP18.08■□□□□ 0.48
COMMD4-213ENST00000565834 LAMA1P25391 3075 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 FAM221BA6H8Z2 402 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 PRICKLE3O43900 615 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-213ENST00000565834 CCDC22O60826 627 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 PEBP1P30086 187 aaKnown RBP18.07■□□□□ 0.48
COMMD4-213ENST00000565834 FASLGP48023 281 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 BIRC2Q13490 618 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 LAPTM5Q13571 262 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 SLBPQ14493 270 aaKnown RBP eCLIP18.07■□□□□ 0.48
COMMD4-213ENST00000565834 HLA-BQ31612 363 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 SGO1Q5FBB7 561 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 METTL21CQ5VZV1 264 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 FRG2Q64ET8 278 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 OGFOD3Q6PK18 319 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 C6orf89Q6UWU4 347 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 ADGRF3Q8IZF5 1079 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 SELENOMQ8WWX9 145 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 USP7Q93009 1102 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms