RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 MAZP56270 477 aaKnown RBP4.03□□□□□ -1.76
CHD9-215ENST00000565442 CLDN15P56746 228 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 KLC1Q07866 573 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 RASGEF1BQ0VAM2 473 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 ILF2Q12905 390 aaKnown RBP4.03□□□□□ -1.76
CHD9-215ENST00000565442 GPR17Q13304 367 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 TNK1Q13470 666 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 HERC3Q15034 1050 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 RRS1Q15050 365 aaKnown RBP4.03□□□□□ -1.76
CHD9-215ENST00000565442 ZRANB3Q5FWF4 1079 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 SLC25A53Q5H9E4 307 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 MEX3BQ6ZN04 569 aaKnown RBP4.03□□□□□ -1.76
CHD9-215ENST00000565442 TMEM182Q6ZP80 229 aaPredicted RBP4.03□□□□□ -1.76
CHD9-215ENST00000565442 SLC16A9Q7RTY1 509 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 NRARPQ7Z6K4 114 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 TIGD4Q8IY51 512 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 FAM9BQ8IZU0 186 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 NDUFAF2Q8N183 169 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 OR10Q1Q8NGQ4 319 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 C9orf43Q8TAL5 461 aaPredicted RBP4.03□□□□□ -1.76
CHD9-215ENST00000565442 GRAPLQ8TC17 118 aaPredicted RBP4.03□□□□□ -1.76
CHD9-215ENST00000565442 RAD54LQ92698 747 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 CORO2AQ92828 525 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 DESI2Q9BSY9 194 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 ZMYND12Q9H0C1 365 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 SHARPINQ9H0F6 387 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 TRPV4Q9HBA0 871 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 SLC52A3Q9NQ40 469 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 GSN-AS1Q9NRJ2 163 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 INTS9Q9NV88 658 aaKnown RBP4.03□□□□□ -1.76
CHD9-215ENST00000565442 RASAL2Q9UJF2 1139 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 TNNQ9UQP3 1299 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 WDR81Q562E7 1941 aa4.03□□□□□ -1.76
CHD9-215ENST00000565442 TRAV24A0A0B4J272 114 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 IGHV4-61A0A0C4DH41 118 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 A0A0G2JLW4 131 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 LUC7L3O95232 432 aaKnown RBP4.02□□□□□ -1.77
CHD9-215ENST00000565442 SIX3O95343 332 aaPredicted RBP4.02□□□□□ -1.77
CHD9-215ENST00000565442 IGHV4-59P01825 116 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 CD48P09326 243 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 MUTP22033 750 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 ITGA3P26006 1051 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 GMPSP49915 693 aaPredicted RBP4.02□□□□□ -1.77
CHD9-215ENST00000565442 ALDH3A2P51648 485 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 VAMP7P51809 220 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 CDR2Q01850 454 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 P2RY6Q15077 328 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 PTGISQ16647 500 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 KIAA1644Q3SXP7 199 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 NHSL2Q5HYW2 709 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 SLC35D3Q5M8T2 416 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 C20orf194Q5TEA3 1177 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 ARHGEF16Q5VV41 709 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 OR4A47Q6IF82 309 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 SH2D5Q6ZV89 423 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 PIGZQ86VD9 579 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 DZIP1Q86YF9 867 aaKnown RBP4.02□□□□□ -1.77
CHD9-215ENST00000565442 KLHL7Q8IXQ5 586 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 APCDD1Q8J025 514 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 KLHDC1Q8N7A1 406 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 NOA1Q8NC60 698 aaKnown RBP4.02□□□□□ -1.77
CHD9-215ENST00000565442 OR4C3Q8NH37 302 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 PANK2Q9BZ23 570 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 MINDY3Q9H8M7 445 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 DDX43Q9NXZ2 648 aaKnown RBP4.02□□□□□ -1.77
CHD9-215ENST00000565442 FLRT3Q9NZU0 649 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 KCNJ14Q9UNX9 436 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 HEG1Q9ULI3 1381 aa4.02□□□□□ -1.77
CHD9-215ENST00000565442 STK36Q9NRP7 1315 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 H0YAE9 185 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 CCER2I3L3R5 266 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 CCL24O00175 119 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 PSMA7O14818 248 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 SLC7A4O43246 635 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 PRAF2O60831 178 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 PGLSO95336 258 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 SERPING1P05155 500 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 SUPT20HL2P0C7V6 817 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 STAG3L1P0CL83 205 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 ERVK-10P10266 1014 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 SPP1P10451 314 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 SP100P23497 879 aaPredicted RBP4.01□□□□□ -1.77
CHD9-215ENST00000565442 PSMB4P28070 264 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 ALDH1B1P30837 517 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 CTNNA1P35221 906 aaKnown RBP4.01□□□□□ -1.77
CHD9-215ENST00000565442 KCNJ1P48048 391 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 MFAP3P55082 362 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 TUBB4BP68371 445 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 TAZQ16635 292 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 KRTAP24-1Q3LI83 254 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 FAM174BQ3ZCQ3 159 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 OR13C3Q8NGS6 347 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 PYCR2Q96C36 320 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 BSCL2Q96G97 398 aaPredicted RBP4.01□□□□□ -1.77
CHD9-215ENST00000565442 ERO1AQ96HE7 468 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 PGLYRP2Q96PD5 576 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 ALDH8A1Q9H2A2 487 aaPredicted RBP4.01□□□□□ -1.77
CHD9-215ENST00000565442 LMAN1LQ9HAT1 526 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 RAB9BQ9NP90 201 aa4.01□□□□□ -1.77
CHD9-215ENST00000565442 ARMCX3Q9UH62 379 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms