RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	IGDCC3	Q8IVU1	814 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	OR10R2	Q8NGX6	335 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	OR5J2	Q8NH18	312 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ADAM32	Q8TC27	787 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	STYX	Q8WUJ0	223 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	GATAD2B	Q8WXI9	593 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	PDXP	Q96GD0	296 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CCDC120	Q96HB5	630 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	DNMT3L	Q9UJW3	386 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SCGN	O76038	276 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TPO	P07202	933 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CETP	P11597	493 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	PSPH	P78330	225 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	NUDT18	Q6ZVK8	323 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	PRSS42	Q7Z5A4	293 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	DUSP18	Q8NEJ0	188 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	OR10A6	Q8NH74	314 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ST8SIA4	Q92187	359 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	UFD1	Q92890	307 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	C14orf119	Q9NWQ9	140 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ERVK13-1	Q9NX77	482 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	UBE2Q2L	H0YL09	131 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	NKIRAS2	Q9NYR9	191 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	OSGIN1	Q9UJX0	560 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ACSM4	P0C7M7	580 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ACPP	P15309	386 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	GK	P32189	559 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	TOMM5	Q8N4H5	51 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	CLRN3	Q8NCR9	226 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	RPLP0P6	Q8NHW5	317 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	RPRD1A	Q96P16	312 aa	Predicted RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ARHGAP39	Q9C0H5	1083 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	POLR2J3	Q9H1A7	115 aa	Known RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC28A3	Q9HAS3	691 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	KLHL11	Q9NVR0	708 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	SIX4	Q9UIU6	781 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	RP2	O75695	350 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	CCNB2	O95067	398 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	KCNQ1	P51787	676 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ECM1	Q16610	540 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	S100PBP	Q96BU1	408 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	IMPA2	O14732	288 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	FABP1	P07148	127 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	KCNAB2	Q13303	367 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC25A52	Q3SY17	297 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	MAP1S	Q66K74	1059 aa	Predicted RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	DPY19L2P1	Q6NXN4	242 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	GFM1	Q96RP9	751 aa	Known RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ELF4	Q99607	663 aa	Predicted RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	RBM38	Q9H0Z9	239 aa	Known RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	DEFB129	Q9H1M3	183 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	INTS7	Q9NVH2	962 aa	Known RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	TNS2	Q63HR2	1409 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	PRAMEF33	A0A0G2JMD5	474 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	PRAMEF10	O60809	474 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	CSF3	P09919	207 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ITGAM	P11215	1152 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	FGF3	P11487	239 aa	Predicted RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ZNF10	P21506	573 aa	Predicted RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	MAZ	P56270	477 aa	Known RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ABHD18	Q0P651	414 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	RPL13AP3	Q6NVV1	102 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	FSTL5	Q8N475	847 aa	Predicted RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	SFXN2	Q96NB2	322 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	CGRRF1	Q99675	332 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	CES3	Q6UWW8	571 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	GALNT5	Q7Z7M9	940 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	OR6V1	Q8N148	313 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	KCNC2	Q96PR1	638 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ROGDI	Q9GZN7	287 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	GTF2IRD1	Q9UHL9	959 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	GJA3	Q9Y6H8	435 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288		M0QYT0	321 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288		M0QYV0	167 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	PPP2R1B	P30154	601 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	PTPN5	P54829	565 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	TGM3	Q08188	693 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	LRIF1	Q5T3J3	769 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	KHDRBS2	Q5VWX1	349 aa	Known RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ZNF655	Q8N720	491 aa	Predicted RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	FAM156A	Q8NDB6	213 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	PIH1D2	Q8WWB5	315 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	PPM1M	Q96MI6	270 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	WAC	Q9BTA9	647 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	GPRC5C	Q9NQ84	441 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	NDFIP2	Q9NV92	336 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	GALP	Q9UBC7	116 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ASH2L	Q9UBL3	628 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	PCDHGA8	Q9Y5G5	932 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	JUP	P14923	745 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	BMP7	P18075	431 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	UBA1	P22314	1058 aa	Known RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	CLCN4	P51793	760 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	PDSS1	Q5T2R2	415 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	COQ8A	Q8NI60	647 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ZFP3	Q96NJ6	502 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	TMPRSS5	Q9H3S3	457 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	CNOT6	Q9ULM6	557 aa	Known RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	PIK3C2A	O00443	1686 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ARL6IP5	O75915	188 aa		4.15	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms