RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 CHD6Q8TD26 2715 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 A0A0J9YY10 115 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 SLC9B1P1A6NJY1 282 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 TK2O00142 265 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 SMIM24O75264 130 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 STK16O75716 305 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 CCNDBP1O95273 360 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 GFAPP14136 432 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 NELFEP18615 380 aaKnown RBP12.28□□□□□ -0.44
CDH11-204ENST00000562712 TAC1P20366 129 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 HRH2P25021 359 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 CMPK1P30085 196 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 LSSP48449 732 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 CLDN6P56747 220 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 HSD11B2P80365 405 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 EIF3IQ13347 325 aaKnown RBP12.28□□□□□ -0.44
CDH11-204ENST00000562712 TSTA3Q13630 321 aaPredicted RBP12.28□□□□□ -0.44
CDH11-204ENST00000562712 NAA25Q14CX7 972 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 SETDB1Q15047 1291 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 ST3GAL2Q16842 350 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 PFKFB4Q16877 469 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 KIAA1614Q5VZ46 1190 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 ICE2Q659A1 982 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 LCTLQ6UWM7 567 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 THOC6Q86W42 341 aaKnown RBP12.28□□□□□ -0.44
CDH11-204ENST00000562712 FBXO39Q8N4B4 442 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 AGBL5Q8NDL9 886 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 RCBTB1Q8NDN9 531 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 UBTD2Q8WUN7 234 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 EXT2Q93063 718 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 PYCR2Q96C36 320 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 TCTN2Q96GX1 697 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 SLC41A2Q96JW4 573 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 PPM1MQ96MI6 270 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 TRAPPC9Q96Q05 1148 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 OR4K3Q96R72 315 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 CMKLR1Q99788 373 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 SH3GL2Q99962 352 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 ACAT2Q9BWD1 397 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 CAPS2Q9BXY5 557 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 IQCGQ9H095 443 aaKnown RBP12.28□□□□□ -0.44
CDH11-204ENST00000562712 WWOXQ9NZC7 414 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 AKAP7Q9P0M2 348 aaPredicted RBP12.28□□□□□ -0.44
CDH11-204ENST00000562712 TAC3Q9UHF0 121 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 EMCNQ9ULC0 261 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 SLC22A14Q9Y267 594 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 APC2O95996 2303 aa12.28□□□□□ -0.44
CDH11-204ENST00000562712 ZZEF1O43149 2961 aa12.27□□□□□ -0.44
CDH11-204ENST00000562712 ACACAQ13085 2346 aa12.27□□□□□ -0.44
CDH11-204ENST00000562712 STX16-NPEPL1H3BU86 382 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 STX16O14662 325 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 TYROBPO43914 113 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 PLIN3O60664 434 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 PROCP04070 461 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 MSL3P1P0C860 447 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 ST6GAL1P15907 406 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 CREB1P16220 341 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 PSMB5P28074 263 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 CSTF2P33240 577 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDH11-204ENST00000562712 GRIA3P42263 894 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 GDF5P43026 501 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 HSPA7P48741 367 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 NFKB2Q00653 900 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 RELAQ04206 551 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 PCBP2Q15366 365 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDH11-204ENST00000562712 C18orf21Q32NC0 220 aaPredicted RBP12.27□□□□□ -0.45
CDH11-204ENST00000562712 PRAMEF13Q5VWM6 474 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 FIGLAQ6QHK4 219 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 D2HGDHQ8N465 521 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 RDH11Q8TC12 318 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 ZBTB9Q96C00 473 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 CCDC126Q96EE4 140 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 TMEM79Q9BSE2 394 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 PDE7BQ9NP56 450 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 MRPS30Q9NP92 439 aaKnown RBP12.27□□□□□ -0.45
CDH11-204ENST00000562712 ZNF446Q9NWS9 450 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 ANKMY1Q9P2S6 941 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 SNX7Q9UNH6 387 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 BTRCQ9Y297 605 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 MSRB2Q9Y3D2 182 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 KCNE2Q9Y6J6 123 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 PCM1Q15154 2024 aa12.27□□□□□ -0.45
CDH11-204ENST00000562712 CCDC187A0A096LP49 1063 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 IGKV1-8A0A0C4DH67 115 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 FAM149AA5PLN7 773 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 G3V2L1 256 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 K7EPI3 171 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 PRPF4O43172 522 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDH11-204ENST00000562712 ATP8B1O43520 1251 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 DLX3O60479 287 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 SPAG7O75391 227 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 SASH3O75995 380 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 WDR47O94967 919 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 GNAZP19086 355 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 ATP5F1P24539 256 aaPredicted RBP12.26□□□□□ -0.45
CDH11-204ENST00000562712 ARL4DP49703 201 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 SEPHS1P49903 392 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 AGTR2P50052 363 aa12.26□□□□□ -0.45
CDH11-204ENST00000562712 YBX1P67809 324 aaKnown RBP12.26□□□□□ -0.45
CDH11-204ENST00000562712 C16orf72Q14CZ0 275 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms