RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 CAPN9O14815 690 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 SMAD6O43541 496 aaKnown RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 SYNGR3O43761 229 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 XPNPEP2O43895 674 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 VEGFDO43915 354 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 SNX3O60493 162 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 RPS6KA5O75582 802 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 SLC22A3O75751 556 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 GLCEO94923 617 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 OLFM2O95897 454 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 GH1P01241 217 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 IGHV4-39P01824 125 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 THEGLP0DJG4 465 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 P4HA1P13674 534 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 IRF2P14316 349 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 DARSP14868 501 aaKnown RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 EPORP19235 508 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 CDH3P22223 829 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 CA4P22748 312 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 MARK3P27448 753 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 DUTP33316 252 aaKnown RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 CTNNB1P35222 781 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 ATP6V1E1P36543 226 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 HSD17B3P37058 310 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 CDKN1AP38936 164 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 FRKP42685 505 aaPredicted RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 FMO5P49326 533 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 LBX1P52954 281 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 GAS1P54826 345 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 MLLT10P55197 1068 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 EEF1A2Q05639 463 aaKnown RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 LGALS3BPQ08380 585 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 TRAF2Q12933 501 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 RPA4Q13156 261 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 HERC3Q15034 1050 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 PPA1Q15181 289 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 CDO1Q16878 200 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 IZUMO4Q1ZYL8 232 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 KBTBD12Q3ZCT8 623 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 ODF2Q5BJF6 829 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 CYP4A22Q5TCH4 519 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 ZNF770Q6IQ21 691 aaPredicted RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 RAB12Q6IQ22 244 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 UNQ6126/PRO20091Q6UXV3 157 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 SIGLEC15Q6ZMC9 328 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 TUBA1AQ71U36 451 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 ZNF771Q7L3S4 317 aaPredicted RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 GET4Q7L5D6 327 aaPredicted RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 RBM23Q86U06 439 aaKnown RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 ZSCAN30Q86W11 494 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 SPATA2LQ8IUW3 424 aaPredicted RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 PLD3Q8IV08 490 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 CROCCP3Q8IVE0 287 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 TDHQ8IZJ6 230 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 LGI2Q8N0V4 545 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 EID3Q8N140 333 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 MUC20Q8N307 709 aaPredicted RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 MAPKAPK5-AS1Q8N8E1 139 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 LRTM2Q8N967 370 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 ZNF383Q8NA42 475 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 RDM1Q8NG50 284 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 OR13A1Q8NGR1 328 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 LMO3Q8TAP4 145 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 CCDC107Q8WV48 283 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 HSD17B8Q92506 261 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 BCL2L2Q92843 193 aaPredicted RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 P2RX5Q93086 422 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 CENPTQ96BT3 561 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 AP2M1Q96CW1 435 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 SGF29Q96ES7 293 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 SLC47A1Q96FL8 570 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 MED30Q96HR3 178 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 ABHD8Q96I13 439 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 EPSTI1Q96J88 318 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 MARK4Q96L34 752 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 SGK494Q96LW2 274 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 TMEM237Q96Q45 408 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 PRAM1Q96QH2 718 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 PANX3Q96QZ0 392 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 ATP6V0BQ99437 205 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 NDNQ99608 321 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 TUBA1CQ9BQE3 449 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 ZNF559Q9BR84 538 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 ZPBPQ9BS86 351 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 NTPCRQ9BSD7 190 aaKnown RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 URM1Q9BTM9 101 aaKnown RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 PI4K2AQ9BTU6 479 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 C1QTNF4Q9BXJ3 329 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 OSBPL8Q9BZF1 889 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 ACPTQ9BZG2 426 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 TRIM7Q9C029 511 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 SLC39A8Q9C0K1 460 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 VPS33BQ9H267 617 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 TFB2MQ9H5Q4 396 aaKnown RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 TLE6Q9H808 572 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 IL1RAPL2Q9NP60 686 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 MID1IP1Q9NPA3 183 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 TCF7L2Q9NQB0 619 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 SDR39U1Q9NRG7 319 aaPredicted RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 FAM207AQ9NSI2 230 aaPredicted RBP1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms