RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 LMO2P25791 158 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SSTR4P31391 388 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 RPS19P39019 145 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 KIAA1024LP59773 190 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TWF1Q12792 350 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 UNC50Q53HI1 259 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 NOMO2Q5JPE7 1267 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 LRCH3Q96II8 777 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 VRTNQ9H8Y1 702 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SMCO4Q9NRQ5 59 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MYEF2Q9P2K5 600 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SLC19A2O60779 497 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 KCNC1P48547 511 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MLLT1Q03111 559 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 FEVQ99581 238 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PCDHA2Q9Y5H9 948 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF335Q9H4Z2 1342 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CAPN15O75808 1086 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GOT2P00505 430 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ADRB2P07550 413 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 UROSP10746 265 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 OR4D2P58180 307 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 FCN2Q15485 313 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF311Q5JNZ3 666 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TMC8Q8IU68 726 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 FDXACB1Q9BRP7 624 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MAN2C1Q9NTJ4 1040 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MIOSQ9NXC5 875 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MGAT4CQ9UBM8 478 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CLDN5O00501 218 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 UBFD1O14562 309 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ALDH1A2O94788 518 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GLAP06280 429 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CDK1P06493 297 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CFHP08603 1231 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GTF2F2P13984 249 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CHRNA5P30532 468 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PYCR1P32322 319 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 DYRK1AQ13627 763 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MPPE1Q53F39 396 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 FAIM2Q9BWQ8 316 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ASB7Q9H672 318 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TCF7L1Q9HCS4 588 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 FZD4Q9ULV1 537 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ANGPT4Q9Y264 503 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PPEF2O14830 753 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 JUNBP17275 347 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PFKLP17858 780 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CDHR3Q6ZTQ4 885 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 FAM124AQ86V42 546 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SPATA22Q8NHS9 363 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TRMT10AQ8TBZ6 339 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GNPDA2Q8TDQ7 276 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 RSRP1Q9BUV0 290 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SLC17A6Q9P2U8 582 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 OR10H1Q9Y4A9 318 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 NR2E3Q9Y5X4 410 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 FGRP09769 529 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GOT1P17174 413 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 UGT2B10P36537 528 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF517Q6ZMY9 492 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 NAGSQ8N159 534 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 DCBLD1Q8N8Z6 715 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PCSK9Q8NBP7 692 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SLC35B2Q8TB61 432 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PYCR2Q96C36 320 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 AGO3Q9H9G7 860 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TRAV18A0A075B6X5 111 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 AP1G1O43747 822 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF821O75541 412 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CDC123O75794 336 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SUPT20HL2P0C7V6 817 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 P2RX3P56373 397 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 LCLAT1Q6UWP7 414 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TSPEARQ8WU66 669 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SENP8Q96LD8 212 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SIRPGQ9P1W8 387 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CASKIN1Q8WXD9 1431 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PHOX2AO14813 284 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GADD45GO95257 159 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TGM6O95932 706 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PAK4O96013 591 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ANXA5P08758 320 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 POLR2LP62875 67 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 COMTD1Q86VU5 262 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 LRRC56Q8IYG6 542 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MCCC2Q9HCC0 563 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 KANSL3Q9P2N6 904 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF223Q9UK11 482 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 APEHP13798 732 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 HPCAL1P37235 193 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 OR1E2P47887 323 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PGGT1BP53609 377 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 RFTN1Q14699 578 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 OR5T2Q8NGG2 359 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 HRH3Q9Y5N1 445 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PLEKHH2Q8IVE3 1493 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 FGBP02675 491 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PKMP14618 531 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 KLRK1P26718 216 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms