RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 EDEM2Q9BV94 578 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 TRIM55Q9BYV6 548 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 EPN3Q9H201 632 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 MID1IP1Q9NPA3 183 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 SEMA4BQ9NPR2 832 aaPredicted RBP11.99□□□□□ -0.49
TPM1-209ENST00000558072 MRGBPQ9NV56 204 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 LRIT1Q9P2V4 623 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 CIDEBQ9UHD4 219 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 SNX7Q9UNH6 387 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 SNX6Q9UNH7 406 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 ICKQ9UPZ9 632 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 BTBD3Q9Y2F9 522 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 PCDHGA11Q9Y5H2 935 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 ARHGEF17Q96PE2 2063 aaPredicted RBP11.99□□□□□ -0.49
TPM1-209ENST00000558072 ANKRD12Q6UB98 2062 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 ISM1B1AKI9 464 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 PROB1E7EW31 1015 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 AZIN1O14977 448 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 CASC3O15234 703 aaKnown RBP11.98□□□□□ -0.49
TPM1-209ENST00000558072 DUX1O43812 170 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 VPS4BO75351 444 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 PROS1P07225 676 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 UROSP10746 265 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 HGFP14210 728 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 NPPBP16860 134 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 HMOX2P30519 316 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 PPM1FP49593 454 aaPredicted RBP11.98□□□□□ -0.49
TPM1-209ENST00000558072 CCR8P51685 355 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 DAB2P98082 770 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 RELAQ04206 551 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 SF1Q15637 639 aaKnown RBP11.98□□□□□ -0.49
TPM1-209ENST00000558072 SLC5A12Q1EHB4 618 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 CCSMST1Q4G0I0 132 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 ICE2Q659A1 982 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 ATG9BQ674R7 924 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 MBOAT1Q6ZNC8 495 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 PLXDC1Q8IUK5 500 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 LRRC56Q8IYG6 542 aaPredicted RBP11.98□□□□□ -0.49
TPM1-209ENST00000558072 LMNTD1Q8N9Z9 388 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 L3MBTL4Q8NA19 623 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 STON2Q8WXE9 905 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 ZUFSPQ96AP4 578 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 WDR34Q96EX3 536 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 ZNF317Q96PQ6 595 aaPredicted RBP11.98□□□□□ -0.49
TPM1-209ENST00000558072 CDC6Q99741 560 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 PLCD4Q9BRC7 762 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 NT5DC2Q9H857 520 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 MRPS30Q9NP92 439 aaKnown RBP11.98□□□□□ -0.49
TPM1-209ENST00000558072 TMEM184CQ9NVA4 438 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 NMRK1Q9NWW6 199 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 HRASLS2Q9NWW9 162 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 KCNK4Q9NYG8 393 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 EPHA6Q9UF33 1036 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 APOBEC2Q9Y235 224 aaKnown RBP11.98□□□□□ -0.49
TPM1-209ENST00000558072 TRAF6Q9Y4K3 522 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 CACNA1HO95180 2353 aa11.98□□□□□ -0.49
TPM1-209ENST00000558072 DMDP11532 3685 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 CABIN1Q9Y6J0 2220 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 GSAPA4D1B5 854 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 EME2A4GXA9 379 aaPredicted RBP11.97□□□□□ -0.49
TPM1-209ENST00000558072 OR6C74A6NCV1 312 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 OR5K3A6NET4 321 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 CDX4O14627 284 aaPredicted RBP11.97□□□□□ -0.49
TPM1-209ENST00000558072 LDOC1O95751 146 aaPredicted RBP11.97□□□□□ -0.49
TPM1-209ENST00000558072 GP1BAP07359 652 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 GIMD1P0DJR0 217 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 C1GALT1C1LP0DN25 315 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 CDK4P11802 303 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 CKMT1AP12532 417 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 GDF5P43026 501 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 GYS2P54840 703 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 CDH13P55290 713 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 MAZP56270 477 aaKnown RBP11.97□□□□□ -0.49
TPM1-209ENST00000558072 IRX1P78414 480 aaPredicted RBP11.97□□□□□ -0.49
TPM1-209ENST00000558072 IFT88Q13099 833 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 CHIT1Q13231 466 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 SQSTM1Q13501 440 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 E2F2Q14209 437 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 AASDHQ4L235 1098 aaPredicted RBP11.97□□□□□ -0.49
TPM1-209ENST00000558072 XKR6Q5GH73 641 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 SH2D4BQ5SQS7 431 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 TTC19Q6DKK2 380 aaPredicted RBP11.97□□□□□ -0.49
TPM1-209ENST00000558072 NXPE4Q6UWF7 544 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 RNF165Q6ZSG1 346 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 ZNF761Q86XN6 746 aaPredicted RBP11.97□□□□□ -0.49
TPM1-209ENST00000558072 SLC35F3Q8IY50 421 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 LRRC34Q8IZ02 419 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 EID2Q8N6I1 236 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 KYQ8NBH2 561 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 ABHD11Q8NFV4 315 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 METTL6Q8TCB7 284 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 AGAP11Q8TF27 550 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 PYCR2Q96C36 320 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 THAP11Q96EK4 314 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 APOLD1Q96LR9 279 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 IL17FQ96PD4 163 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 TWSG1Q9GZX9 223 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 ACTR10Q9NZ32 417 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 TAC3Q9UHF0 121 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 PLAGL1Q9UM63 463 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms