RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 CD22P20273 847 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 MAP4P27816 1152 aaKnown RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 IMPA1P29218 277 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 HNRNPH1P31943 449 aaKnown RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 ACSL1P33121 698 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 DPP6P42658 865 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 ZFP36L2P47974 494 aaKnown RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 MRPL19P49406 292 aaKnown RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 TPMTP51580 245 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 DIO3P55073 304 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 NME5P56597 212 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 SGCGQ13326 291 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 RIPK1Q13546 671 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 NAE1Q13564 534 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TDGQ13569 410 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 CYLC2Q14093 348 aaPredicted RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 FASTKQ14296 549 aaKnown RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 LEXMQ3ZCV2 418 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 FBXO43Q4G163 708 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 DNAL1Q4LDG9 190 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 EOGTQ5NDL2 527 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TBC1D3GQ6DHY5 549 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TBC1D3CQ6IPX1 549 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 PGM2L1Q6PCE3 622 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 AGTRAPQ6RW13 159 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 IL27RAQ6UWB1 636 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 KIAA1324Q6UXG2 1013 aaKnown RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 RNF165Q6ZSG1 346 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 USP30Q70CQ3 517 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 SPATA19Q7Z5L4 167 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 FAM124AQ86V42 546 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 LRRTM4Q86VH4 590 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 AMZ2Q86W34 360 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 LRRC56Q8IYG6 542 aaPredicted RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 ULK2Q8IYT8 1036 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TBC1D3Q8IZP1 549 aaPredicted RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 DSELQ8IZU8 1212 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 ARMC10Q8N2F6 343 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 L3MBTL4Q8NA19 623 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 PPFIBP2Q8ND30 876 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 OR56A3Q8NH54 315 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 WDR60Q8WVS4 1066 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 ASB12Q8WXK4 309 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 RCN3Q96D15 328 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 MSANTD3Q96H12 275 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TEX37Q96LM6 180 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 CCDC138Q96M89 665 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 GUCD1Q96NT3 240 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 NPAS2Q99743 824 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 NRTNQ99748 197 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 SLC29A3Q9BZD2 475 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 MMADHCQ9H3L0 296 aaPredicted RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 SLC52A3Q9NQ40 469 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 SDR39U1Q9NRG7 319 aaPredicted RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 INTS7Q9NVH2 962 aaKnown RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 AIG1Q9NVV5 245 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 KLQ9UEF7 1012 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 EBF1Q9UH73 591 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 ZNHIT2Q9UHR6 403 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 FZD4Q9ULV1 537 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 SCML1Q9UN30 329 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 NDRG2Q9UN36 371 aaKnown RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 SLC17A4Q9Y2C5 497 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 CA5BQ9Y2D0 317 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 PLEKHM1Q9Y4G2 1056 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TICRRQ7Z2Z1 1910 aa7.15□□□□□ -1.27
SPG11-204ENST00000557866 CKAP5Q14008 2032 aa7.15□□□□□ -1.27
SPG11-204ENST00000557866 POM121BA6NF01 834 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 C9JVG2 144 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 GIPC1O14908 333 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 ADAM11O75078 769 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 CLDN9O95484 217 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 CHEK2O96017 543 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 IGLV1-40P01703 118 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 SNRPB2P08579 225 aaKnown RBP7.14□□□□□ -1.27
SPG11-204ENST00000557866 MYCLP1P12525 358 aaPredicted RBP7.14□□□□□ -1.27
SPG11-204ENST00000557866 IL9P15248 144 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 CAPN3P20807 821 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 IL12AP29459 219 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 HMOX2P30519 316 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 ARL1P40616 181 aaPredicted RBP7.14□□□□□ -1.27
SPG11-204ENST00000557866 ACADVLP49748 655 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 CCR3P51677 355 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 MNAT1P51948 309 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 NEK2P51955 445 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 CLDN2P57739 230 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 ERVK-8P63133 956 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 MXRA7P84157 204 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 HMGCS1Q01581 520 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 PLOD1Q02809 727 aaPredicted RBP7.14□□□□□ -1.27
SPG11-204ENST00000557866 PCDH1Q08174 1060 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 C19orf57Q0VDD7 668 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 RPA4Q13156 261 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 FZD5Q13467 585 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 KPNB1Q14974 876 aaKnown RBP7.14□□□□□ -1.27
SPG11-204ENST00000557866 MLF2Q15773 248 aaPredicted RBP7.14□□□□□ -1.27
SPG11-204ENST00000557866 GSTA3Q16772 222 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 TTC31Q49AM3 519 aaPredicted RBP7.14□□□□□ -1.27
SPG11-204ENST00000557866 GGTA1PQ4G0N0 100 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 SGO1Q5FBB7 561 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms