RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 IMMTQ16891 758 aaKnown RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 SHROOM1Q2M3G4 852 aaPredicted RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 SLC36A3Q495N2 470 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 TMEM41BQ5BJD5 291 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 ELFN2Q5R3F8 820 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 C9orf50Q5SZB4 431 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 GRTP1Q5TC63 336 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 LYSMD4Q5XG99 296 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 WBP2NLQ6ICG8 309 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 SULT1C3Q6IMI6 304 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 FAM166AQ6J272 317 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 KLC3Q6P597 504 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 SIGLEC15Q6ZMC9 328 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 DGLUCYQ7Z3D6 616 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 GPSM1Q86YR5 675 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CROCCP3Q8IVE0 287 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 FOXRED2Q8IWF2 684 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CDH26Q8IXH8 852 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 PALM2Q8IXS6 379 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CENPLQ8N0S6 344 aaPredicted RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 ZCCHC7Q8N3Z6 543 aaKnown RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 FAM133AQ8N9E0 248 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CCDC63Q8NA47 563 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 MIGA1Q8NAN2 632 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 OR52B4Q8NGK2 314 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 OR13C2Q8NGS9 318 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 OR4A16Q8NH70 328 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 MAGEC3Q8TD91 643 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 DQX1Q8TE96 717 aaKnown RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 SLC44A1Q8WWI5 657 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 OIT3Q8WWZ8 545 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 WASF1Q92558 559 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 SEMA4DQ92854 862 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 ULK4Q96C45 1275 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 C16orf58Q96GQ5 468 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 PCDHB18PQ96TA0 734 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CCT7Q99832 543 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 TRMOQ9BU70 441 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 ZSCAN5AQ9BUG6 496 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 FICDQ9BVA6 458 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 FTHL17Q9BXU8 183 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 MAP6D1Q9H9H5 199 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 SLC2A4RGQ9NR83 387 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 SMPD3Q9NY59 655 aaPredicted RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 PKD2L2Q9NZM6 624 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CNOT2Q9NZN8 540 aaKnown RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 ST6GALNAC2Q9UJ37 374 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 TINAGQ9UJW2 476 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 ADAM21Q9UKJ8 722 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 PADI3Q9ULW8 664 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 ENTPD4Q9Y227 616 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 TMED5Q9Y3A6 229 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 MFHAS1Q9Y4C4 1052 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 A0A0G2JPF8 293 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 A0A1W2PP11 408 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 A6NNC1 897 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 HNRNPCL3B7ZW38 293 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 MDM4O15151 490 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 CHADO15335 359 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 ITM2AO43736 263 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 TLX2O43763 284 aaPredicted RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 TBX19O60806 448 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 VPS26AO75436 327 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 BAG3O95817 575 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 SFTPBP07988 381 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 HNRNPCL4P0DMR1 293 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 BMP7P18075 431 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 TMOD1P28289 359 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 PRDX6P30041 224 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 HLA-FP30511 346 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 DHPSP49366 369 aaPredicted RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 SH3BGRP55822 239 aaPredicted RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 CLDN15P56746 228 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 SEC61BP60468 96 aaKnown RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 COG7P83436 770 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 EEF1A2Q05639 463 aaKnown RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 MBTD1Q05BQ5 628 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 DSC1Q08554 894 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 PRKAA1Q13131 559 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 TUBA3CQ13748 450 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 DDX39BQ13838 428 aaKnown RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 ZMYND11Q15326 602 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 CCDC152Q4G0S7 254 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 RAB6CQ53S08 254 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 MIIPQ5JXC2 388 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 CYP4A22Q5TCH4 519 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 UGT3A1Q6NUS8 523 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 RGMBQ6NW40 437 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 ARHGAP11AQ6P4F7 1023 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 TUBA3EQ6PEY2 450 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 CES3Q6UWW8 571 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 PLXDC2Q6UX71 529 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 ZYG11AQ6WRX3 759 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 DEF8Q6ZN54 512 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 TTLL10Q6ZVT0 673 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 TAS2R42Q7RTR8 314 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 ATG9AQ7Z3C6 839 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 RTN4RL2Q86UN3 420 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 CUZD1Q86UP6 607 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms