RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 KIAA1614Q5VZ46 1190 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 TLDC1Q6P9B6 456 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 FAM20CQ8IXL6 584 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 CLIP3Q96DZ5 547 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 SLC45A3Q96JT2 553 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 MIPEPQ99797 713 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 PCBD2Q9H0N5 130 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 ACTR5Q9H9F9 607 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-211ENST00000557623 MRPS30Q9NP92 439 aaKnown RBP12.01□□□□□ -0.49
SLIRP-211ENST00000557623 LHX9Q9NQ69 397 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 IRAK4Q9NWZ3 460 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 KCND3Q9UK17 655 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 ADAMTS6Q9UKP5 1117 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 PDE10AQ9Y233 779 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 PTPRQQ9UMZ3 2332 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 ZNF891A8MT65 544 aaPredicted RBP12□□□□□ -0.49
SLIRP-211ENST00000557623 C21orf140B9A014 251 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 E7ENX8 843 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 CCND1P24385 295 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 PSMB5P28074 263 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 IMPA1P29218 277 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 DLSTP36957 453 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 GABRA4P48169 554 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 ABATP80404 500 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 TAP2Q03519 686 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 PRDX1Q06830 199 aaKnown RBP12□□□□□ -0.49
SLIRP-211ENST00000557623 USP10Q14694 798 aaKnown RBP12□□□□□ -0.49
SLIRP-211ENST00000557623 DEFB110Q30KQ9 67 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 TCTE1Q5JU00 501 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 THEMIS2Q5TEJ8 643 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 ICE2Q659A1 982 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 FCRL6Q6DN72 434 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 SUSD1Q6UWL2 747 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 MCATQ8IVS2 390 aaKnown RBP12□□□□□ -0.49
SLIRP-211ENST00000557623 IFT20Q8IY31 132 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 PPM1NQ8N819 430 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 PPFIBP2Q8ND30 876 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 ATL1Q8WXF7 558 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 DLG3Q92796 817 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 GPR22Q99680 433 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 DPH2Q9BQC3 489 aaPredicted RBP12□□□□□ -0.49
SLIRP-211ENST00000557623 ACAT2Q9BWD1 397 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 GPAMQ9HCL2 828 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 CCDC177Q9NQR7 707 aaPredicted RBP12□□□□□ -0.49
SLIRP-211ENST00000557623 EURLQ9NYK6 297 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 STOX2Q9P2F5 926 aaPredicted RBP12□□□□□ -0.49
SLIRP-211ENST00000557623 TAC3Q9UHF0 121 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 CROTQ9UKG9 612 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 NOVA2Q9UNW9 492 aaKnown RBP12□□□□□ -0.49
SLIRP-211ENST00000557623 SRPK3Q9UPE1 567 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 KLHL20Q9Y2M5 609 aa12□□□□□ -0.49
SLIRP-211ENST00000557623 MTO1Q9Y2Z2 717 aaKnown RBP12□□□□□ -0.49
SLIRP-211ENST00000557623 CELSR3Q9NYQ7 3312 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 MEN1O00255 615 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 ZSCAN9O15535 394 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-211ENST00000557623 ZNF749O43361 778 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 SRPX2O60687 465 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-211ENST00000557623 PIAS1O75925 651 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 C1QAP02745 245 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 STMN1P16949 149 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 TCN2P20062 427 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 AGXTP21549 392 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 HRH2P25021 359 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 GPS2Q13227 327 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 TMEM207Q6UWW9 146 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 LRRC56Q8IYG6 542 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-211ENST00000557623 DSELQ8IZU8 1212 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 MR1Q95460 341 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 RNF31Q96EP0 1072 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 UBL7Q96S82 380 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-211ENST00000557623 CYTH2Q99418 400 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 C17orf62Q9BQA9 187 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 DPH7Q9BTV6 452 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 NDC1Q9BTX1 674 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 GPR87Q9BY21 358 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 ARL15Q9NXU5 204 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 NINJ2Q9NZG7 142 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 SNX7Q9UNH6 387 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 PCDHGA6Q9Y5G7 932 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 PKD1L2Q7Z442 2459 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 ZFHX4Q86UP3 3567 aa11.99□□□□□ -0.49
SLIRP-211ENST00000557623 OR2A25A4D2G3 310 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 H3BMH7 237 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 ERVH48-1M5A8F1 160 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 HCRTR1O43613 425 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 WT1P19544 449 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-211ENST00000557623 ECHS1P30084 290 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 RORAP35398 523 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 PGGT1BP53609 377 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 ARSFP54793 590 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 TBPL1P62380 186 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 RPS15P62841 145 aaKnown RBP11.98□□□□□ -0.49
SLIRP-211ENST00000557623 RELAQ04206 551 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 DNASE1L3Q13609 305 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 ZNF460Q14592 562 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 GRM7Q14831 915 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 SLMAPQ14BN4 828 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 PHKG1Q16816 387 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 TUSC1Q2TAM9 212 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 CRTC2Q53ET0 693 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms