RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 MOCS2O96007 188 aaPredicted RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 DLATP10515 647 aaKnown RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 CSF2RAP15509 400 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 AREGP15514 252 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 ITGA2P17301 1181 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 UGT1A6P19224 532 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 GNL1P36915 607 aaPredicted RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 NKX2-1P43699 371 aaPredicted RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 MMP13P45452 471 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 TKTL1P51854 596 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 PDX1P52945 283 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 SRP54P61011 504 aaKnown RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 BNC1Q01954 994 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 GCNT1Q02742 428 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 DPTQ07507 201 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 DSC1Q08554 894 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 RASGEF1BQ0VAM2 473 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 ZNF155Q12901 538 aaPredicted RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 PDE7AQ13946 482 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 GAMTQ14353 236 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 KARSQ15046 597 aaKnown RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 CALCRLQ16602 461 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 WSCD2Q2TBF2 565 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 TAF1BQ53T94 588 aaPredicted RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 ZNF626Q68DY1 528 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 PM20D1Q6GTS8 502 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 OR7E24Q6IFN5 339 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 ABRAXAS1Q6UWZ7 409 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 OLFM4Q6UX06 510 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 SIGLEC15Q6ZMC9 328 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 PLEKHM3Q6ZWE6 761 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 ARMC9Q7Z3E5 817 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 ASPGQ86U10 573 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 ELMOD2Q8IZ81 293 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 SMRP1Q8NCR6 262 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 PPFIBP2Q8ND30 876 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 ZNF540Q8NDQ6 660 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 IPMKQ8NFU5 416 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 OR4K1Q8NGD4 311 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 IRGQQ8WZA9 623 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 PIGBQ92521 554 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 TANKQ92844 425 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 TRIM44Q96DX7 344 aaPredicted RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 TMEM19Q96HH6 336 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 SAMD8Q96LT4 415 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 FAM20AQ96MK3 541 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 OR1F2PQ96R84 312 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 RASL10BQ96S79 203 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 NAP1L3Q99457 506 aaPredicted RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 DDX50Q9BQ39 737 aaKnown RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 TRAF4Q9BUZ4 470 aaPredicted RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 TEX13AQ9BXU3 409 aaPredicted RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 SLC39A8Q9C0K1 460 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 RBM38Q9H0Z9 239 aaKnown RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 CARD9Q9H257 536 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 ARRDC1-AS1Q9H2J1 176 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 FAM118AQ9NWS6 357 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 CGNQ9P2M7 1197 aaKnown RBP2.95□□□□□ -1.94
TRAV28-201ENST00000557548 SIX4Q9UIU6 781 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 KLK4Q9Y5K2 254 aa2.95□□□□□ -1.94
TRAV28-201ENST00000557548 A0A087X0K7 114 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 IGLV5-52A0A0A0MRZ9 124 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 A0A0B4J203 849 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 A0A1W2PRB8 838 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 FAM149AA5PLN7 773 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 CFAP73A6NFT4 308 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 LILRA5A6NI73 299 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 PRR32B1ATL7 298 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 E9PI62 339 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 MPHOSPH10O00566 681 aaKnown RBP2.94□□□□□ -1.94
TRAV28-201ENST00000557548 RASGRF2O14827 1237 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 KCNJ13O60928 360 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 LDB3O75112 727 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 PDGFBP01127 241 aaPredicted RBP2.94□□□□□ -1.94
TRAV28-201ENST00000557548 TFAP2AP05549 437 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 CELA2AP08217 269 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 LINC00271P0C7V0 271 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 SP9P0CG40 484 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 GM2AP17900 193 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 ARF4P18085 180 aaPredicted RBP2.94□□□□□ -1.94
TRAV28-201ENST00000557548 SSTR1P30872 391 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 HOXD3P31249 432 aaPredicted RBP2.94□□□□□ -1.94
TRAV28-201ENST00000557548 CHRNA3P32297 505 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 TNNT2P45379 298 aaPredicted RBP2.94□□□□□ -1.94
TRAV28-201ENST00000557548 RPL21P46778 160 aaKnown RBP2.94□□□□□ -1.94
TRAV28-201ENST00000557548 THOP1P52888 689 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 INHBEP58166 350 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 SLC26A5P58743 744 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 RPS18P62269 152 aaKnown RBP2.94□□□□□ -1.94
TRAV28-201ENST00000557548 SULT2A1Q06520 285 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 IL10RBQ08334 325 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 SLC20A2Q08357 652 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 TRAF3Q13114 568 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 MFAP5Q13361 173 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 GTF2H2Q13888 395 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 TRIM29Q14134 588 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 RABEP1Q15276 862 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 STXBP2Q15833 593 aa2.94□□□□□ -1.94
TRAV28-201ENST00000557548 INAQ16352 499 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms