RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 EGFL6Q8IUX8 553 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 ZC3H7AQ8IWR0 971 aaKnown RBP7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 PLPP6Q8IY26 295 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 RNF168Q8IYW5 571 aaPredicted RBP7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 CFAP52Q8N1V2 620 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 PAF1Q8N7H5 531 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 ARL10Q8N8L6 244 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 L3MBTL4Q8NA19 623 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 KDF1Q8NAX2 398 aaPredicted RBP7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 ZNF461Q8TAF7 563 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 SLC22A17Q8WUG5 538 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 FBLIM1Q8WUP2 373 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 ITFG2Q969R8 447 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 TMIGD2Q96BF3 282 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 RHBDF1Q96CC6 855 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 CXorf40BQ96DE9 158 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 VMP1Q96GC9 406 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 PPM1MQ96MI6 270 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 ZNF641Q96N77 438 aaPredicted RBP7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 MUS81Q96NY9 551 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 CASD1Q96PB1 797 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 OR52E6Q96RD3 313 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 NODALQ96S42 347 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 ZNF347Q96SE7 839 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 ACOX2Q99424 681 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 GPR62Q9BZJ7 368 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 ELOVL6Q9H5J4 265 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 KAT8Q9H7Z6 458 aaKnown RBP7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 NTN4Q9HB63 628 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 PREBQ9HCU5 417 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 TM9SF3Q9HD45 589 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 PARD6AQ9NPB6 346 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 INTS7Q9NVH2 962 aaKnown RBP7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 SPATA6Q9NWH7 488 aaPredicted RBP7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 FAM120CQ9NX05 1096 aaKnown RBP7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 MARCH5Q9NX47 278 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 KIAA1522Q9P206 1035 aaPredicted RBP7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 ZNF490Q9ULM2 529 aaPredicted RBP7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 SLC27A5Q9Y2P5 690 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 PPIL1Q9Y3C6 166 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 BOLA1Q9Y3E2 137 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 POLR3HQ9Y535 204 aaPredicted RBP7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 PCDHB9Q9Y5E1 797 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 PCDHGC4Q9Y5F7 938 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 PCDHGA2Q9Y5H1 932 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 MRPL42Q9Y6G3 142 aaKnown RBP7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 TTC3P53804 2025 aa7.09□□□□□ -1.27
MTHFD1-215ENST00000557370 CNOT1A5YKK6 2376 aaKnown RBP7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 TRBV5-3A0A0A0MS03 114 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 A0A1B0GVG6 124 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 A8MVJ9 347 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 CLDN25C9JDP6 229 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 UPK1AO00322 258 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 NUAK1O60285 661 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 ABLIM3O94929 683 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 HNRNPCP07910 306 aaKnown RBP eCLIP7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 ABCB1P08183 1280 aaPredicted RBP7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 GNAO1P09471 354 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 PIRTP0C851 137 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 NCK1P16333 377 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 JUNDP17535 347 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 ATF6P18850 670 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 PRDX3P30048 256 aaKnown RBP7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 DNAJA1P31689 397 aaKnown RBP7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 CA8P35219 290 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 SLC11A1P49279 550 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 PSMD7P51665 324 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 EPHB3P54753 998 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 CDH15P55291 814 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 RPS24P62847 133 aaKnown RBP7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 RPL38P63173 70 aaKnown RBP7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 TUBA1BP68363 451 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 PHEXP78562 749 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 ECT2LQ008S8 904 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 CSTF1Q05048 431 aaKnown RBP7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 KRR1Q13601 381 aaKnown RBP7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 CDH18Q13634 790 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 PTPRCAPQ14761 206 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 ABRAXAS2Q15018 415 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 TEAD4Q15561 434 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 LPAL2Q16609 132 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 DGUOKQ16854 277 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 RGS21Q2M5E4 152 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 PLEKHG6Q3KR16 790 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 FAM174BQ3ZCQ3 159 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 RFTN2Q52LD8 501 aaPredicted RBP7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 MPPE1Q53F39 396 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 USP39Q53GS9 565 aaKnown RBP7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 OTUD3Q5T2D3 398 aaPredicted RBP7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 ANXA8L1Q5VT79 327 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 ZNF691Q5VV52 312 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 PLPP4Q5VZY2 271 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 KIAA1841Q6NSI8 718 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 NIPAL1Q6NVV3 410 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 NEK5Q6P3R8 708 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 TUBA3EQ6PEY2 450 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 KLHL35Q6PF15 583 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 SYCE2Q6PIF2 218 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 TPRG1Q6ZUI0 275 aa7.08□□□□□ -1.28
MTHFD1-215ENST00000557370 TUBA1AQ71U36 451 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms