RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 ATP5F1P24539 256 aaPredicted RBP13.76□□□□□ -0.21
CHD8-208ENST00000555301 PSMB5P28074 263 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 CSTF2P33240 577 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHD8-208ENST00000555301 CLDN6P56747 220 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 NFKB2Q00653 900 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 EIF3IQ13347 325 aaKnown RBP13.76□□□□□ -0.21
CHD8-208ENST00000555301 PCBP2Q15366 365 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHD8-208ENST00000555301 TRIM73Q86UV7 250 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 C17orf64Q86WR6 236 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 SLC22A9Q8IVM8 553 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 CHCHD4Q8N4Q1 142 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 PTGR2Q8N8N7 351 aaPredicted RBP13.76□□□□□ -0.21
CHD8-208ENST00000555301 AGBL5Q8NDL9 886 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 TCP10LQ8TDR4 215 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 TLCD1Q96CP7 247 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 PHF21BQ96EK2 531 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 TCTN2Q96GX1 697 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 LIN37Q96GY3 246 aaPredicted RBP13.76□□□□□ -0.21
CHD8-208ENST00000555301 SLC41A2Q96JW4 573 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 TRAPPC9Q96Q05 1148 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 CMKLR1Q99788 373 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 CHRNA10Q9GZZ6 450 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 DNAJC11Q9NVH1 559 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 ZNF446Q9NWS9 450 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 GPRC5BQ9NZH0 403 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 ANKMY1Q9P2S6 941 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 OPTCQ9UBM4 332 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 DYRK1BQ9Y463 629 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 KLK4Q9Y5K2 254 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 DMXL1Q9Y485 3027 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 A8MT66 165 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 K7EPI3 171 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 TM9SF1O15321 606 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 PRPF4O43172 522 aaKnown RBP eCLIP13.75□□□□□ -0.21
CHD8-208ENST00000555301 CCNT2O60583 730 aaKnown RBP13.75□□□□□ -0.21
CHD8-208ENST00000555301 ST6GAL1P15907 406 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 NELFEP18615 380 aaKnown RBP13.75□□□□□ -0.21
CHD8-208ENST00000555301 MAGP20916 626 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 GDF5P43026 501 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 LSSP48449 732 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 PIK3CGP48736 1102 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 SEPHS1P49903 392 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 MAGOHP61326 146 aaKnown RBP13.75□□□□□ -0.21
CHD8-208ENST00000555301 HSD11B2P80365 405 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 TARDBPQ13148 414 aaKnown RBP eCLIP13.75□□□□□ -0.21
CHD8-208ENST00000555301 C18orf21Q32NC0 220 aaPredicted RBP13.75□□□□□ -0.21
CHD8-208ENST00000555301 TMTC4Q5T4D3 741 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 KIAA1614Q5VZ46 1190 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 ZYG11AQ6WRX3 759 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 C19orf47Q8N9M1 422 aaKnown RBP13.75□□□□□ -0.21
CHD8-208ENST00000555301 RCBTB1Q8NDN9 531 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 ARMC2Q8NEN0 867 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 SLC5A11Q8WWX8 675 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 ESAMQ96AP7 390 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 ATP6V1G3Q96LB4 118 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 PPM1MQ96MI6 270 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 FAM111AQ96PZ2 611 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 OR4K3Q96R72 315 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 PDE7BQ9NP56 450 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 KCNK9Q9NPC2 374 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 SOHLH2Q9NX45 425 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 SNX7Q9UNH6 387 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 BTRCQ9Y297 605 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 CFAP54Q96N23 3096 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 CEP250Q9BV73 2442 aa13.75□□□□□ -0.21
CHD8-208ENST00000555301 CCDC187A0A096LP49 1063 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 HMGB1P1B2RPK0 211 aaPredicted RBP13.74□□□□□ -0.21
CHD8-208ENST00000555301 G3V2L1 256 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 DLX3O60479 287 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 CPA3P15088 417 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 PVRP15151 417 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 GNAZP19086 355 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 GRIA3P42263 894 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 AGTR2P50052 363 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 PRKAA2P54646 552 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 CDC16Q13042 620 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 C16orf72Q14CZ0 275 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 PDK4Q16654 411 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 FBXO48Q5FWF7 155 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 CYB5D1Q6P9G0 228 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 FIGLAQ6QHK4 219 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 FAM20CQ8IXL6 584 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 D2HGDHQ8N465 521 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 ARL8AQ96BM9 186 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 DPH7Q9BTV6 452 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 C1QTNF3Q9BXJ4 246 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 TMEM184CQ9NVA4 438 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 SLC17A7Q9P2U7 560 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 COPG2Q9UBF2 871 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 ANGPTL3Q9Y5C1 460 aa13.74□□□□□ -0.21
CHD8-208ENST00000555301 CLGNO14967 610 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 KATNA1O75449 491 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 ZWINTO95229 277 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 SIX3O95343 332 aaPredicted RBP13.73□□□□□ -0.21
CHD8-208ENST00000555301 EPB42P16452 691 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 IMPDH1P20839 514 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 EEF1DP29692 281 aaKnown RBP13.73□□□□□ -0.21
CHD8-208ENST00000555301 GRK3P35626 688 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 MLLT3P42568 568 aaPredicted RBP13.73□□□□□ -0.21
CHD8-208ENST00000555301 SLC18A1P54219 525 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms