RNA–Protein interactions for RNA: ENST00000555088.5

GSKIP-204, Transcript of GSK3B interacting protein, humanhuman

TSL 5

Gene GSKIP, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-204ENST00000555088 ATG10Q9H0Y0 220 aa12.12□□□□□ -0.47
GSKIP-204ENST00000555088 SEMA6CQ9H3T2 930 aa12.12□□□□□ -0.47
GSKIP-204ENST00000555088 EHD1Q9H4M9 534 aa12.12□□□□□ -0.47
GSKIP-204ENST00000555088 C1GALT1Q9NS00 363 aa12.12□□□□□ -0.47
GSKIP-204ENST00000555088 INTS7Q9NVH2 962 aaKnown RBP12.12□□□□□ -0.47
GSKIP-204ENST00000555088 SPHK1Q9NYA1 384 aa12.12□□□□□ -0.47
GSKIP-204ENST00000555088 OPTCQ9UBM4 332 aa12.12□□□□□ -0.47
GSKIP-204ENST00000555088 SNX7Q9UNH6 387 aa12.12□□□□□ -0.47
GSKIP-204ENST00000555088 LAMA1P25391 3075 aa12.12□□□□□ -0.47
GSKIP-204ENST00000555088 DOCK9Q9BZ29 2069 aa12.12□□□□□ -0.47
GSKIP-204ENST00000555088 SDK1Q7Z5N4 2213 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 A0A0J9YY10 115 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 ISM1B1AKI9 464 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 E2F3O00716 465 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 SNUPNO95149 360 aaKnown RBP12.11□□□□□ -0.47
GSKIP-204ENST00000555088 EPB42P16452 691 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 EEF1DP29692 281 aaKnown RBP12.11□□□□□ -0.47
GSKIP-204ENST00000555088 CMPK1P30085 196 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 CSF2RBP32927 897 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 SERPINB5P36952 375 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 CASP2P42575 452 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 HSPA7P48741 367 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 PPP2R2AP63151 447 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 SIM1P81133 766 aaPredicted RBP12.11□□□□□ -0.47
GSKIP-204ENST00000555088 CFHR1Q03591 330 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 ZFP36L1Q07352 338 aaKnown RBP12.11□□□□□ -0.47
GSKIP-204ENST00000555088 SPIDRQ14159 915 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 E2F2Q14209 437 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 PCLAFQ15004 111 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 SF1Q15637 639 aaKnown RBP12.11□□□□□ -0.47
GSKIP-204ENST00000555088 TBCCQ15814 346 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 PDK4Q16654 411 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 RSPO4Q2I0M5 234 aaPredicted RBP12.11□□□□□ -0.47
GSKIP-204ENST00000555088 ZNF678Q5SXM1 525 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 THEMIS2Q5TEJ8 643 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 HHATQ5VTY9 493 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 NKAIN2Q5VXU1 208 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 IRGCQ6NXR0 463 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 SUSD1Q6UWL2 747 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 RBM44Q6ZP01 1051 aaKnown RBP12.11□□□□□ -0.47
GSKIP-204ENST00000555088 C17orf64Q86WR6 236 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 SLITRK4Q8IW52 837 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 PPFIBP2Q8ND30 876 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 ABHD11Q8NFV4 315 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 ZNF483Q8TF39 744 aaPredicted RBP12.11□□□□□ -0.47
GSKIP-204ENST00000555088 ZUFSPQ96AP4 578 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 ZBTB9Q96C00 473 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 PYCR2Q96C36 320 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 PHF21BQ96EK2 531 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 MAGEB10Q96LZ2 347 aaPredicted RBP12.11□□□□□ -0.47
GSKIP-204ENST00000555088 TMEM74Q96NL1 305 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 OR4K3Q96R72 315 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 NRTNQ99748 197 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 PITHD1Q9GZP4 211 aaPredicted RBP12.11□□□□□ -0.47
GSKIP-204ENST00000555088 C12orf65Q9H3J6 166 aaKnown RBP12.11□□□□□ -0.47
GSKIP-204ENST00000555088 DLL3Q9NYJ7 618 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 TAC3Q9UHF0 121 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 PCTPQ9UKL6 214 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 SLC22A14Q9Y267 594 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 DYRK1BQ9Y463 629 aa12.11□□□□□ -0.47
GSKIP-204ENST00000555088 HGSO14964 777 aaPredicted RBP12.1□□□□□ -0.47
GSKIP-204ENST00000555088 CCNT2O60583 730 aaKnown RBP12.1□□□□□ -0.47
GSKIP-204ENST00000555088 UGDHO60701 494 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 WDR47O94967 919 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 KCNK5O95279 499 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 ZBTB11O95625 1053 aaPredicted RBP12.1□□□□□ -0.47
GSKIP-204ENST00000555088 MLYCDO95822 493 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 FTH1P19P0C7X4 201 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 THRAP10827 490 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 NR1D1P20393 614 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 GRK2P25098 689 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 CCKBRP32239 447 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 HPDP32754 393 aaPredicted RBP12.1□□□□□ -0.47
GSKIP-204ENST00000555088 GDF5P43026 501 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 PPM1FP49593 454 aaPredicted RBP12.1□□□□□ -0.47
GSKIP-204ENST00000555088 AGTR2P50052 363 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 NOVA1P51513 510 aaKnown RBP12.1□□□□□ -0.47
GSKIP-204ENST00000555088 USP53Q70EK8 1073 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 NUDCD3Q8IVD9 361 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 TRIM42Q8IWZ5 723 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 OR4K1Q8NGD4 311 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 OR6Y1Q8NGX8 325 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 RAB3IL1Q8TBN0 382 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 SLC5A11Q8WWX8 675 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 KLHL6Q8WZ60 621 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 WDR34Q96EX3 536 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 TCTN2Q96GX1 697 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 SLC41A2Q96JW4 573 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 TGM7Q96PF1 710 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 SELENOSQ9BQE4 189 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 NUDT22Q9BRQ3 303 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 PELI2Q9HAT8 420 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 MRPS30Q9NP92 439 aaKnown RBP12.1□□□□□ -0.47
GSKIP-204ENST00000555088 TMEM184CQ9NVA4 438 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 ANGPTL3Q9Y5C1 460 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 PIEZO1Q92508 2521 aa12.1□□□□□ -0.47
GSKIP-204ENST00000555088 RIF1Q5UIP0 2472 aaKnown RBP12.1□□□□□ -0.47
GSKIP-204ENST00000555088 IGHV5-10-1A0A0J9YXX1 117 aa12.09□□□□□ -0.47
GSKIP-204ENST00000555088 SPAARA0A1B0GVQ0 90 aa12.09□□□□□ -0.47
GSKIP-204ENST00000555088 CLGNO14967 610 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms