RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 GRAMD1AQ96CP6 724 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 MIPEPQ99797 713 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 C1QTNF3Q9BXJ4 246 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 FAM60AQ9NP50 221 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 SSU72Q9NP77 194 aaKnown RBP14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 CUEDC1Q9NWM3 386 aaPredicted RBP14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 CD274Q9NZQ7 290 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 KLHL20Q9Y2M5 609 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 PLLPQ9Y342 182 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 PCDHB11Q9Y5F2 797 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 OR2A25A4D2G3 310 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 A8MU76 341 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 COPEO14579 308 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 DLX3O60479 287 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 SPAG7O75391 227 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 IPO13O94829 963 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 ZBTB11O95625 1053 aaPredicted RBP14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 ADRB1P08588 477 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 MYZAPP0CAP1 466 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 MAGP20916 626 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 CCND1P24385 295 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 ETV4P43268 484 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 CCT5P48643 541 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 HSPA7P48741 367 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 ALDH18A1P54886 795 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 PCDH1Q08174 1060 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 PCBP2Q15366 365 aaKnown RBP eCLIP14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 SNAP47Q5SQN1 464 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 PHF19Q5T6S3 580 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 PRAMEF13Q5VWM6 474 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 CAPN13Q6MZZ7 669 aaPredicted RBP14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 ARMC6Q6NXE6 501 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 THOC6Q86W42 341 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 PAQR7Q86WK9 346 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 KMT5CQ86Y97 462 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 GALNT15Q8N3T1 639 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 PTGR2Q8N8N7 351 aaPredicted RBP14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 ABHD11Q8NFV4 315 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 EGFL8Q99944 293 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 ACAT2Q9BWD1 397 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 CD244Q9BZW8 370 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 KLHL25Q9H0H3 589 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 PCBD2Q9H0N5 130 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 ENAMQ9NRM1 1142 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 PILRAQ9UKJ1 303 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 KLK13Q9UKR3 277 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 SLC22A14Q9Y267 594 aa14.28□□□□□ -0.12
MTHFD1-204ENST00000553405 ZFHX4Q86UP3 3567 aa14.27□□□□□ -0.12
MTHFD1-204ENST00000553405 H3BMH7 237 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 TMX2-CTNND1H3BSU7 103 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 STX16-NPEPL1H3BU86 382 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 STX16O14662 325 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 CTSVO60911 334 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 STK16O75716 305 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 SIX3O95343 332 aaPredicted RBP14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 RPS17P08708 135 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 MSL3P1P0C860 447 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 JUPP14923 745 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 CDH3P22223 829 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 KCNA4P22459 653 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 RPA3P35244 121 aaPredicted RBP14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 ABATP80404 500 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 SF1Q15637 639 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 PFKFB4Q16877 469 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 TTMPQ5BVD1 217 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 FIGLAQ6QHK4 219 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 FBXO39Q8N4B4 442 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 DNAJC22Q8N4W6 341 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 C19orf47Q8N9M1 422 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 OR4K1Q8NGD4 311 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 NEIL2Q969S2 332 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 ALKBH8Q96BT7 664 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 MED8Q96G25 268 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 SCYL1Q96KG9 808 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 DPH7Q9BTV6 452 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 OCIAD1Q9NX40 245 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 WWOXQ9NZC7 414 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 SLC17A7Q9P2U7 560 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 GRID1Q9ULK0 1009 aa14.27□□□□□ -0.13
MTHFD1-204ENST00000553405 CCDC187A0A096LP49 1063 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 E2F3O00716 465 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 PRPF4O43172 522 aaKnown RBP eCLIP14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 RASSF9O75901 435 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 EBLN1P0CF75 366 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 FGF3P11487 239 aaPredicted RBP14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 CCL4P13236 92 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 HGFP14210 728 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 FOLR1P15328 257 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 ETV5P41161 510 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 SEPHS1P49903 392 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 PRKAA2P54646 552 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 SH3BP2P78314 561 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 CSNK1G2P78368 415 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 HSD11B2P80365 405 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 RELAQ04206 551 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 FOXC1Q12948 553 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 KCNAB1Q14722 419 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 CCDC153Q494R4 210 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 AGBL2Q5U5Z8 902 aa14.26□□□□□ -0.13
MTHFD1-204ENST00000553405 METTL2BQ6P1Q9 378 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms