RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 DLGAP4Q9Y2H0 992 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 AP3M1Q9Y2T2 418 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 PCDHB5Q9Y5E4 795 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 ZFP37Q9Y6Q3 630 aaPredicted RBP11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 PRAMEF11O60813 436 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 TMCC2O75069 709 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 KCNK2O95069 426 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 PTGER3P43115 390 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 SLC11A2P49281 568 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 VLDLRP98155 873 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 ST3GAL4Q11206 333 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 NFE2Q16621 373 aaPredicted RBP11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 TBRG1Q3YBR2 411 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 PDZK1Q5T2W1 519 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 SYT6Q5T7P8 510 aaPredicted RBP11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 ARMC12Q5T9G4 340 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 SZRD1Q7Z422 152 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 GPR149Q86SP6 731 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 NPLOC4Q8TAT6 608 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 DPF3Q92784 378 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 VPS35Q96QK1 796 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 BOCQ9BWV1 1114 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 TAS2R16Q9NYV7 291 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 TRPV2Q9Y5S1 764 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 TBKBP1A7MCY6 615 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 M0QX08 132 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 MANBAO00462 879 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 OR7A17O14581 309 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 CLDN9O95484 217 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 PRR35P0CG20 571 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 TACR1P25103 407 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 KDELR2P33947 212 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 SOAT1P35610 550 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 CDKN2CP42773 168 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 TTLL9Q3SXZ7 439 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 BCL7AQ4VC05 210 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 ATXN7L2Q5T6C5 722 aaPredicted RBP11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 MANEALQ5VSG8 457 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 GLB1LQ6UWU2 654 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 ZNF517Q6ZMY9 492 aaPredicted RBP11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 SLC34A3Q8N130 599 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 STK40Q8N2I9 435 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 ST13P5Q8NFI4 369 aaPredicted RBP11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 GPR150Q8NGU9 434 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 LILRB4Q8NHJ6 448 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 KCNJ9Q92806 393 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 RHBDF1Q96CC6 855 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 IL4I1Q96RQ9 567 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 PHOX2BQ99453 314 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 COQ7Q99807 217 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 TMEM98Q9Y2Y6 226 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 ANKRD66B4E2M5 251 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 SLC16A6O15403 523 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 KIAA0513O60268 411 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 PCDHGA12O60330 932 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 PEX11BO96011 259 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 TUSC3Q13454 348 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 SNAP47Q5SQN1 464 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 RNF219Q5W0B1 726 aaPredicted RBP11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 ATG9BQ674R7 924 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 LAIR2Q6ISS4 152 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 TSPYL5Q86VY4 417 aaPredicted RBP11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 VPS37AQ8NEZ2 397 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 MTERF3Q96E29 417 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 TSPAN18Q96SJ8 248 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 CENPOQ9BU64 300 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 HOXD1Q9GZZ0 328 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 IRF2BPLQ9H1B7 796 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 KCNH4Q9UQ05 1017 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 MGAMO43451 1857 aa11.27□□□□□ -0.6
PPFIA2-227ENST00000552948 SNX4O95219 450 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 RETP07949 1114 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 PAX3P23760 479 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 MAPK1P28482 360 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 ZFP36L2P47974 494 aaKnown RBP11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 RPIAP49247 311 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 ZNF45Q02386 682 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 PPP2R2DQ66LE6 453 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 TMPRSS11AQ6ZMR5 421 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 NEK10Q6ZWH5 1172 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 GPC2Q8N158 579 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 RNF175Q8N4F7 328 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 PJA1Q8NG27 643 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 MAL2Q969L2 176 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 MTERF1Q99551 399 aaKnown RBP11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 FEVQ99581 238 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 DUSP21Q9H596 190 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 RNF181Q9P0P0 153 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 SPASTQ9UBP0 616 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 ZNF638Q14966 1978 aaKnown RBP11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 MAGEB17A8MXT2 336 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 H3BN98 237 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 SSX4O60224 188 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 CPNE3O75131 537 aaKnown RBP11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 EPOP01588 193 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 MZF1P28698 734 aaPredicted RBP11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 ACSM2AQ08AH3 577 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 PRSS36Q5K4E3 855 aa11.27□□□□□ -0.61
PPFIA2-227ENST00000552948 CTSL3PQ5NE16 218 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms