RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 KIF18AQ8NI77 898 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 DNAJB14Q8TBM8 379 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 SLC22A18Q96BI1 424 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 ZNF778Q96MU6 729 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 TTC1Q99614 292 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 IRAK4Q9NWZ3 460 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 SYBUQ9NX95 663 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 IL1RAPL1Q9NZN1 696 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 SAMD15Q9P1V8 674 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 NXT1Q9UKK6 140 aaKnown RBP11.35□□□□□ -0.59
CKAP4-202ENST00000552828 PLAGL1Q9UM63 463 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 SOX13Q9UN79 622 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 KLK4Q9Y5K2 254 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 HS3ST3B1Q9Y662 390 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 FAM187AA6NFU0 413 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 OR51F1A6NGY5 319 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 VSTM2BA6NLU5 285 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 EFCAB8A8MWE9 144 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 F8W8V4 182 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 SMAPO00193 183 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 NDC80O14777 642 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 LRRTM2O43300 516 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 OR1I1O60431 355 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 FKBP9O95302 570 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 S1PR4O95977 384 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 GOT2P00505 430 aaKnown RBP11.34□□□□□ -0.59
CKAP4-202ENST00000552828 NMBRP28336 390 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 CCR7P32248 378 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 PPARGP37231 505 aaPredicted RBP11.34□□□□□ -0.59
CKAP4-202ENST00000552828 C2orf54Q08AI8 447 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 ZNF169Q14929 603 aaPredicted RBP11.34□□□□□ -0.59
CKAP4-202ENST00000552828 MORF4L2Q15014 288 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 FASTKD1Q53R41 847 aaKnown RBP11.34□□□□□ -0.59
CKAP4-202ENST00000552828 ZC3H12BQ5HYM0 836 aaKnown RBP11.34□□□□□ -0.59
CKAP4-202ENST00000552828 TCTE1Q5JU00 501 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 FCRL6Q6DN72 434 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 ZNF572Q7Z3I7 529 aaPredicted RBP11.34□□□□□ -0.59
CKAP4-202ENST00000552828 FAM20CQ8IXL6 584 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 OR11G2Q8NGC1 345 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 OR2L8Q8NGY9 312 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 GRHL3Q8TE85 626 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 FAR1Q8WVX9 515 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 ASZ1Q8WWH4 475 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 SNF8Q96H20 258 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 LMF1Q96S06 567 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 TRIM51Q9BSJ1 452 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 TRIM31Q9BZY9 425 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 LHPPQ9H008 270 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 SEMA3GQ9NS98 782 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 TREX1Q9NSU2 369 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 CUTCQ9NTM9 273 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 ANAPC5Q9UJX4 755 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 KLHL20Q9Y2M5 609 aa11.34□□□□□ -0.59
CKAP4-202ENST00000552828 ANKRD17O75179 2603 aaKnown RBP11.34□□□□□ -0.59
CKAP4-202ENST00000552828 FAM237BA0A1B0GVD1 139 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 TARM1B6A8C7 271 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 PRICKLE3O43900 615 aaPredicted RBP11.33□□□□□ -0.6
CKAP4-202ENST00000552828 SLCO2B1O94956 709 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 SEC31AO94979 1220 aaKnown RBP11.33□□□□□ -0.6
CKAP4-202ENST00000552828 RPN2P04844 631 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 PAMP19021 973 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 TNFRSF8P28908 595 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 MAGEA3P43357 314 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 PER3P56645 1201 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 Q0VFX4 171 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 GRM7Q14831 915 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 TLR1Q15399 786 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 ZRSR2Q15696 482 aaKnown RBP11.33□□□□□ -0.6
CKAP4-202ENST00000552828 AARS2Q5JTZ9 985 aaKnown RBP11.33□□□□□ -0.6
CKAP4-202ENST00000552828 IRAK1BP1Q5VVH5 260 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 RPUSD3Q6P087 351 aaKnown RBP11.33□□□□□ -0.6
CKAP4-202ENST00000552828 FIGLAQ6QHK4 219 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 CES3Q6UWW8 571 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 UNC5DQ6UXZ4 953 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 VRK3Q8IV63 474 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 DCUN1D3Q8IWE4 304 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 PDIK1LQ8N165 341 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 MPP5Q8N3R9 675 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 BBOF1Q8ND07 529 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 MNS1Q8NEH6 495 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 MYRIPQ8NFW9 859 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 ZUFSPQ96AP4 578 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 MFSD3Q96ES6 412 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 VPS50Q96JG6 964 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 SLX1AQ9BQ83 275 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 TRIM56Q9BRZ2 755 aaKnown RBP11.33□□□□□ -0.6
CKAP4-202ENST00000552828 ERP44Q9BS26 406 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 CARD6Q9BX69 1037 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 CATSPERZQ9NTU4 200 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 INTS7Q9NVH2 962 aaKnown RBP11.33□□□□□ -0.6
CKAP4-202ENST00000552828 ENTPD4Q9Y227 616 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 MAD1L1Q9Y6D9 718 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 PCM1Q15154 2024 aa11.33□□□□□ -0.6
CKAP4-202ENST00000552828 UQCRHLA0A096LP55 91 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 RASGRF2O14827 1237 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 CD3EAPO15446 510 aaKnown RBP11.32□□□□□ -0.6
CKAP4-202ENST00000552828 RAD51CO43502 376 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 SRPX2O60687 465 aaPredicted RBP11.32□□□□□ -0.6
CKAP4-202ENST00000552828 ALOX12BO75342 701 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 VAPBO95292 243 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms