RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 TTC29Q8NA56 475 aaPredicted RBP14.6□□□□□ -0.07
CUX1-214ENST00000550008 NOL6Q9H6R4 1146 aaKnown RBP14.6□□□□□ -0.07
CUX1-214ENST00000550008 WDR26Q9H7D7 661 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 SEMA3GQ9NS98 782 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 DNAJB9Q9UBS3 223 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 ZNF232Q9UNY5 417 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 ZNF780BQ9Y6R6 833 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 LOC285095A0A1B0GVY8 99 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 KRT87PA6NCN2 255 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 ACADVLP49748 655 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 RPL26P61254 145 aaKnown RBP14.59□□□□□ -0.07
CUX1-214ENST00000550008 PIGGQ5H8A4 983 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 RFLNAQ6ZTI6 216 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 SLC39A11Q8N1S5 342 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 RERGQ96A58 199 aaPredicted RBP14.59□□□□□ -0.07
CUX1-214ENST00000550008 SLC46A2Q9BY10 475 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 POPDC3Q9HBV1 291 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 ZC4H2Q9NQZ6 224 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 KLHL1Q9NR64 748 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 AIG1Q9NVV5 245 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 ATP6V1HQ9UI12 483 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 PIPSLA2A3N6 862 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 LATO43561 262 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 SNAP29O95721 258 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 ADRA1AP35348 466 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 HNMTP50135 292 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 TAS2R50P59544 299 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 MGAT3Q09327 533 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 NR1D2Q14995 579 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 INAQ16352 499 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 SLC8B1Q6J4K2 584 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 ERICH5Q6P6B1 374 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 ZNF438Q7Z4V0 828 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 SLC34A3Q8N130 599 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 KCT2Q8NC54 265 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 PSMA8Q8TAA3 256 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 NODALQ96S42 347 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 ZNF607Q96SK3 696 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 TPT1P8Q9HAU6 139 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 TMEM165Q9HC07 324 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 ZCCHC3Q9NUD5 404 aaKnown RBP14.59□□□□□ -0.07
CUX1-214ENST00000550008 PDE10AQ9Y233 779 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 M0QX08 132 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 CREG1O75629 220 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 TSPAN19P0C672 248 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 RYKP34925 604 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 UGT2B15P54855 530 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 PAGE3Q5JUK9 113 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 IER5LQ5T953 404 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 ARMC3Q5W041 872 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 LRRC70Q7Z2Q7 622 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 WDR48Q8TAF3 677 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 ARNT2Q9HBZ2 717 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 CLN6Q9NWW5 311 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 CCDC85CA6NKD9 419 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 HTRA2O43464 458 aaPredicted RBP14.59□□□□□ -0.07
CUX1-214ENST00000550008 VIPP01282 170 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 IFNW1P05000 195 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 CDH1P12830 882 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 CST5P28325 142 aaPredicted RBP14.59□□□□□ -0.07
CUX1-214ENST00000550008 CTGFP29279 349 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 RAB8AP61006 207 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 RGS1Q08116 209 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 TOP3AQ13472 1001 aaPredicted RBP14.59□□□□□ -0.07
CUX1-214ENST00000550008 CTC1Q2NKJ3 1217 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 ADAMTS15Q8TE58 950 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 AHCYL2Q96HN2 611 aaKnown RBP14.59□□□□□ -0.07
CUX1-214ENST00000550008 RSPH9Q9H1X1 276 aaPredicted RBP14.59□□□□□ -0.07
CUX1-214ENST00000550008 FBXL12Q9NXK8 326 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 OR10H1Q9Y4A9 318 aa14.59□□□□□ -0.07
CUX1-214ENST00000550008 COL11A2P13942 1736 aaPredicted RBP14.59□□□□□ -0.07
CUX1-214ENST00000550008 GOLGB1Q14789 3259 aaKnown RBP14.58□□□□□ -0.07
CUX1-214ENST00000550008 NUDT6P53370 316 aa14.58□□□□□ -0.07
CUX1-214ENST00000550008 BLOC1S3Q6QNY0 202 aa14.58□□□□□ -0.07
CUX1-214ENST00000550008 HMGN2P46Q86SG4 172 aa14.58□□□□□ -0.07
CUX1-214ENST00000550008 TICAM1Q8IUC6 712 aa14.58□□□□□ -0.07
CUX1-214ENST00000550008 SHKBP1Q8TBC3 707 aa14.58□□□□□ -0.07
CUX1-214ENST00000550008 GLYATL1Q969I3 302 aa14.58□□□□□ -0.07
CUX1-214ENST00000550008 PKP4Q99569 1192 aa14.58□□□□□ -0.07
CUX1-214ENST00000550008 RAD9AQ99638 391 aa14.58□□□□□ -0.07
CUX1-214ENST00000550008 SLC30A3Q99726 388 aa14.58□□□□□ -0.07
CUX1-214ENST00000550008 DPH2Q9BQC3 489 aaPredicted RBP14.58□□□□□ -0.07
CUX1-214ENST00000550008 SLC35A5Q9BS91 424 aa14.58□□□□□ -0.07
CUX1-214ENST00000550008 MAT2BQ9NZL9 334 aa14.58□□□□□ -0.07
CUX1-214ENST00000550008 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.58□□□□□ -0.08
CUX1-214ENST00000550008 RXRGP48443 463 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 ENPP7Q6UWV6 458 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 GPR65Q8IYL9 337 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 PRICKLE1Q96MT3 831 aaPredicted RBP14.58□□□□□ -0.08
CUX1-214ENST00000550008 KLF16Q9BXK1 252 aaPredicted RBP14.58□□□□□ -0.08
CUX1-214ENST00000550008 RMI1Q9H9A7 625 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 GULP1Q9UBP9 304 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 KIAA1217Q5T5P2 1943 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 H7BY64 318 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 ZNF30P17039 623 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 CDK9P50750 372 aaKnown RBP14.58□□□□□ -0.08
CUX1-214ENST00000550008 BLVRAP53004 296 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 SPANXN2Q5MJ10 180 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 NOXRED1Q6NXP6 359 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 TCEAL8Q8IYN2 117 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms