RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 VTCN1Q7Z7D3 282 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 NLGN4XQ8N0W4 816 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 ZNF675Q8TD23 568 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 SUSD3Q96L08 255 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 CDK5RAP1Q96SZ6 601 aaKnown RBP22.48■■□□□ 1.19
NPAS3-206ENST00000548645 NTMT1Q9BV86 223 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 ZNF408Q9H9D4 720 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 PCDHGA3Q9Y5H0 932 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 C9P02748 559 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 CXCR2P25025 360 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 GRK5P34947 590 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 SOX6P35712 828 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 HTR3AP46098 478 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 RGS4P49798 205 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 UGT2B15P54855 530 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 ITGA1P56199 1179 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 ASCC1Q8N9N2 400 aaKnown RBP22.48■■□□□ 1.19
NPAS3-206ENST00000548645 USP7Q93009 1102 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 MYEOVQ96EZ4 313 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 GABARAPL3Q9BY60 117 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 MARCH7Q9H992 704 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 SIRT5Q9NXA8 310 aa22.48■■□□□ 1.19
NPAS3-206ENST00000548645 LOC730098B7Z3J9 87 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 POLR2EP19388 210 aaKnown RBP22.47■■□□□ 1.19
NPAS3-206ENST00000548645 KDELR2P33947 212 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 VMACQ2NL98 169 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 MRPL10Q7Z7H8 261 aaKnown RBP22.47■■□□□ 1.19
NPAS3-206ENST00000548645 HSH2DQ96JZ2 352 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 APOL5Q9BWW9 433 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 OR51E2Q9H255 320 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 TRPV2Q9Y5S1 764 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 SLC12A8A0AV02 714 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 CLCA1A8K7I4 914 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 H7C0S8 307 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 SCO2O43819 266 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 PRPS2P11908 318 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 SLC14A1Q13336 389 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 TMC5Q6UXY8 1006 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.47■■□□□ 1.19
NPAS3-206ENST00000548645 UBQLNLQ8IYU4 475 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 DNAJC22Q8N4W6 341 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 OR7D4Q8NG98 312 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 NPLOC4Q8TAT6 608 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 CCDC32Q9BV29 185 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 MAGEH1Q9H213 219 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 TBC1D14Q9P2M4 693 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 SPASTQ9UBP0 616 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 DLGAP4Q9Y2H0 992 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 TLL1O43897 1013 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 ITGB1P05556 798 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 SLC19A1P41440 591 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 GPR15P49685 360 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 MRPS15P82914 257 aaKnown RBP22.47■■□□□ 1.19
NPAS3-206ENST00000548645 TUSC3Q13454 348 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 C10orf120Q5SQS8 335 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 PTRHD1Q6GMV3 140 aaKnown RBP22.47■■□□□ 1.19
NPAS3-206ENST00000548645 GPR153Q6NV75 609 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 ERICH5Q6P6B1 374 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 EIF3MQ7L2H7 374 aaKnown RBP22.47■■□□□ 1.19
NPAS3-206ENST00000548645 SYT17Q9BSW7 474 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 KATNAL1Q9BW62 490 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 ADGRE3Q9BY15 652 aa22.47■■□□□ 1.19
NPAS3-206ENST00000548645 OLA1Q9NTK5 396 aaKnown RBP22.47■■□□□ 1.19
NPAS3-206ENST00000548645 ANKRD66B4E2M5 251 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 TSPAN3O60637 253 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 DDNO94850 711 aaPredicted RBP22.46■■□□□ 1.19
NPAS3-206ENST00000548645 ARHGEF15O94989 841 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 VIPP01282 170 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 KRT6AP02538 564 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 KRT6BP04259 564 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 KRT6CP48668 564 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 PAF1Q8N7H5 531 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 GGHQ92820 318 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 MTFMTQ96DP5 389 aaKnown RBP22.46■■□□□ 1.19
NPAS3-206ENST00000548645 SPON2Q9BUD6 331 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 SLC29A3Q9BZD2 475 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 PCDHGC4Q9Y5F7 938 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 RAI2Q9Y5P3 530 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 EPB42P16452 691 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 CR2P20023 1033 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 TACR2P21452 398 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 GJA5P36382 358 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 SLC15A1P46059 708 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 CPT1AP50416 773 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 OLR1P78380 273 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 CBLL1Q75N03 491 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 ZSWIM9Q86XI8 627 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 BEND7Q8N7W2 519 aaPredicted RBP22.46■■□□□ 1.19
NPAS3-206ENST00000548645 TESCQ96BS2 214 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 C8orf48Q96LL4 319 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 Q96MT0 163 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 COL21A1Q96P44 957 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 CHCHD6Q9BRQ6 235 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 CIPCQ9C0C6 399 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 RNF167Q9H6Y7 350 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 ADARB2Q9NS39 739 aaKnown RBP22.46■■□□□ 1.19
NPAS3-206ENST00000548645 GPRC5BQ9NZH0 403 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 GRIP1Q9Y3R0 1128 aa22.46■■□□□ 1.19
NPAS3-206ENST00000548645 ARPC4P59998 168 aa22.45■■□□□ 1.18
NPAS3-206ENST00000548645 CACNG1Q06432 222 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms