RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 C6orf141Q5SZD1 244 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 GPRC6AQ5T6X5 926 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 PRR23BQ6ZRT6 265 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 HSD11B1LQ7Z5J1 315 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 TMEM179BQ7Z7N9 219 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 IGFN1Q86VF2 1251 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 C8orf59Q8N0T1 100 aaPredicted RBP16.7■□□□□ 0.26
SPIDR-227ENST00000541342 FBXO30Q8TB52 745 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 FIG4Q92562 907 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 FUNDC2Q9BWH2 189 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 GORASP2Q9H8Y8 452 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 PCDH12Q9NPG4 1184 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 ERGIC3Q9Y282 383 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 KIAA1549LQ6ZVL6 1849 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 HEPACAM2A8MVW5 462 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 RFXAPO00287 272 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 JAK1P23458 1154 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 FCARP24071 287 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 VASPP50552 380 aaPredicted RBP16.7■□□□□ 0.26
SPIDR-227ENST00000541342 PTGR1Q14914 329 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 LDLRAP1Q5SW96 308 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 ZDHHC13Q8IUH4 622 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 KIAA1958Q8N8K9 716 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 OR8J3Q8NGG0 315 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 METTL6Q8TCB7 284 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 HPS4Q9NQG7 708 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 ZDHHC3Q9NYG2 299 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 SLC25A37Q9NYZ2 338 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 CHRNB3Q05901 458 aa16.69■□□□□ 0.26
SPIDR-227ENST00000541342 CD47Q08722 323 aa16.69■□□□□ 0.26
SPIDR-227ENST00000541342 SFSWAPQ12872 951 aaKnown RBP16.69■□□□□ 0.26
SPIDR-227ENST00000541342 GOLGA7Q7Z5G4 137 aa16.69■□□□□ 0.26
SPIDR-227ENST00000541342 OR4F6Q8NGB9 312 aa16.69■□□□□ 0.26
SPIDR-227ENST00000541342 ELOVL2Q9NXB9 296 aa16.69■□□□□ 0.26
SPIDR-227ENST00000541342 TMEM221A6NGB7 291 aa16.69■□□□□ 0.26
SPIDR-227ENST00000541342 VIPR1P32241 457 aa16.69■□□□□ 0.26
SPIDR-227ENST00000541342 PPP2R2DQ66LE6 453 aa16.69■□□□□ 0.26
SPIDR-227ENST00000541342 ABHD11Q8NFV4 315 aa16.69■□□□□ 0.26
SPIDR-227ENST00000541342 WFIKKN2Q8TEU8 576 aa16.69■□□□□ 0.26
SPIDR-227ENST00000541342 RHBDF1Q96CC6 855 aa16.69■□□□□ 0.26
SPIDR-227ENST00000541342 FAM83CQ9BQN1 747 aa16.69■□□□□ 0.26
SPIDR-227ENST00000541342 UPK3BL1B0FP48 263 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 UPK3BL2E5RIL1 263 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 ADAM23O75077 832 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 BCAS1O75363 584 aaPredicted RBP16.68■□□□□ 0.26
SPIDR-227ENST00000541342 PCMT1P22061 227 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 OPRL1P41146 370 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 NSG1P42857 185 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 MAGEA8P43361 318 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 KCNAB2Q13303 367 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 NR6A1Q15406 480 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 AP5B1Q2VPB7 878 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 PIWIL3Q7Z3Z3 882 aaKnown RBP16.68■□□□□ 0.26
SPIDR-227ENST00000541342 ZBTB2Q8N680 514 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 OR2T12Q8NG77 320 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 OR10A6Q8NH74 314 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 GTF2H4Q92759 462 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 SCAMP4Q969E2 229 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 MUL1Q969V5 352 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 DGKBQ9Y6T7 804 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 IGLV3-16A0A075B6K0 115 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 METAP1P53582 386 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 GP2P55259 537 aaKnown RBP16.68■□□□□ 0.26
SPIDR-227ENST00000541342 TRAF3Q13114 568 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 ARHGEF7Q14155 803 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 CTF1Q16619 201 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 CYP2A13Q16696 494 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 ZNF805Q5CZA5 627 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 C10orf111Q8N326 155 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 COPS8Q99627 209 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 PFDN4Q9NQP4 134 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 DNAJB9Q9UBS3 223 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 PDE10AQ9Y233 779 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 DOCK8Q8NF50 2099 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 CFAP99D6REC4 459 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 LINC01565O15544 149 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 KATNA1O75449 491 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 NFATC1O95644 943 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 CST1P01037 141 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 ETV3P41162 512 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 RDH12Q96NR8 316 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 DGCR6LQ9BY27 220 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 RAD21L1Q9H4I0 556 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 SLC6A13Q9NSD5 602 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 EXD2Q9NVH0 621 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 NAALAD2Q9Y3Q0 740 aa16.68■□□□□ 0.26
SPIDR-227ENST00000541342 C16orf96A6NNT2 1141 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 INMTO95050 263 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 CYP2A6P11509 494 aaPredicted RBP16.67■□□□□ 0.26
SPIDR-227ENST00000541342 ZNF30P17039 623 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 ISL1P61371 349 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 SPIDRQ14159 915 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 TANGO2Q6ICL3 276 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 Q6ZVL8 140 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 CHPFQ8IZ52 775 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 LMAN2LQ9H0V9 348 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 USE1Q9NZ43 259 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 NUDT4Q9NZJ9 180 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 ADGRE2Q9UHX3 823 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 B3GNT3Q9Y2A9 372 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms