RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 RAD51BO15315 384 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 VIPP01282 170 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 HSMCR30P0CW71 290 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 ZNF7P17097 686 aaPredicted RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 AQP1P29972 269 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 COPZ1P61923 177 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 CDH18Q13634 790 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 PON2Q15165 354 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 PRSS36Q5K4E3 855 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 CERS6Q6ZMG9 384 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 ZNF783Q6ZMS7 281 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 SNX20Q7Z614 316 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 NECAB2Q7Z6G3 386 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 VTCN1Q7Z7D3 282 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 CCDC103Q8IW40 242 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 RGL4Q8IZJ4 473 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 RNF175Q8N4F7 328 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 GPR26Q8NDV2 337 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 MCFD2Q8NI22 146 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 TRMT2BQ96GJ1 504 aaKnown RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 CEP295NLQ96MC4 621 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 SLX1AQ9BQ83 275 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 INPP5KQ9BT40 448 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 TPK1Q9H3S4 243 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 INTS6Q9UL03 887 aaKnown RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 ABCG2Q9UNQ0 655 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 PCDHGA10Q9Y5H3 936 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 COL4A6Q14031 1691 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 NPIPB15A6NHN6 443 aaPredicted RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 FAM20BO75063 409 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 ALDH1A1P00352 501 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 MYCP01106 439 aaPredicted RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 CD36P16671 472 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 CTSOP43234 321 aaPredicted RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 CRISP3P54108 245 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 PPP2R2BQ00005 443 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 CLCA4Q14CN2 919 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 RBFAQ8N0V3 343 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 LIX1Q8N485 282 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 CELF2-AS1Q8N7Q2 184 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 SLC13A3Q8WWT9 602 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 PROX1Q92786 737 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 LGALS12Q96DT0 336 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 EGFL8Q99944 293 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 ASPSCR1Q9BZE9 553 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 TP63Q9H3D4 680 aaPredicted RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 IL21Q9HBE4 155 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 C14orf119Q9NWQ9 140 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 DNAJB9Q9UBS3 223 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 SNX8Q9Y5X2 465 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 PIKFYVEQ9Y2I7 2098 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 GOLGA4Q13439 2230 aaKnown RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 PQBP1O60828 265 aaKnown RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 SEC22BO75396 215 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 C7P10643 843 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 B4GALNT1Q00973 533 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 SF1Q15637 639 aaKnown RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 TAF12Q16514 161 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 DGUOKQ16854 277 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 ZBTB2Q8N680 514 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 PAF1Q8N7H5 531 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 DCAF4L2Q8NA75 395 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 ZHX1-C8orf76Q96EF9 292 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 TSSK3Q96PN8 268 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 FAM126AQ9BYI3 521 aaPredicted RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 REXO4Q9GZR2 422 aaKnown RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 TMEM45AQ9NWC5 275 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 TMEFF2Q9UIK5 374 aaPredicted RBP12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 ELOVL7A1L3X0 281 aa12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 GRXCR2A6NFK2 248 aa12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 AP3D1O14617 1153 aa12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 KCNK2O95069 426 aa12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 IGFBP5P24593 272 aa12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 CD40LGP29965 261 aa12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 CD70P32970 193 aa12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 TUBA3CQ13748 450 aa12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 EID3Q8N140 333 aa12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 ZNF548Q8NEK5 533 aaPredicted RBP12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 OR6Q1Q8NGQ2 317 aa12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 VWCEQ96DN2 955 aa12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 YTHDF1Q9BYJ9 559 aaKnown RBP12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 HMX1Q9NP08 348 aaPredicted RBP12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 ZNF490Q9ULM2 529 aaPredicted RBP12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 PCDHGA3Q9Y5H0 932 aa12.21□□□□□ -0.45
SFSWAP-208ENST00000539506 C5orf42Q9H799 3197 aa12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 GLYATL1P3A0A0U1RQE8 302 aa12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 STK19P49842 368 aaPredicted RBP12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 AP1S1P61966 158 aa12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 RACK1P63244 317 aaKnown RBP12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 BCL2L1Q07817 233 aa12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 SLC14A1Q13336 389 aa12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 HIST2H2ACQ16777 129 aaPredicted RBP12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 CYP27C1Q4G0S4 372 aa12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 MFSD4BQ5TF39 518 aa12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 STEAP3Q658P3 488 aa12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 DESI1Q6ICB0 168 aa12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 HJURPQ8NCD3 748 aaPredicted RBP12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 OR52E6Q96RD3 313 aa12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 DPH2Q9BQC3 489 aaPredicted RBP12.21□□□□□ -0.46
SFSWAP-208ENST00000539506 UGT2B28Q9BY64 529 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms