RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SPG11Q96JI7 2443 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 CROCCQ5TZA2 2017 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 SOWAHDA6NJG2 315 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 H3BMM5 538 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 MYO1CO00159 1063 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 TXNDC9O14530 226 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 PRPF4O43172 522 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 KLHL18O94889 574 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 BMP10O95393 424 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 MED26O95402 600 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 PRR35P0CG20 571 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 COX6A1P12074 109 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 ICAM2P13598 275 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 ACPPP15309 386 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 ELAVL4P26378 380 aaKnown RBP10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 FOXL2P58012 376 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 TMED2Q15363 201 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 RBBP7Q16576 425 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 HIF1AQ16665 826 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 TYSND1Q2T9J0 566 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 CCDC38Q502W7 563 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 ZNF425Q6IV72 752 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 TTC23LQ6PF05 361 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 RAD9BQ6WBX8 426 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 MICALCLQ6ZW33 695 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 NEK10Q6ZWH5 1172 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 TMEM139Q8IV31 216 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 KBTBD2Q8IY47 623 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 RAB42Q8N4Z0 105 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 DNAAF3Q8N9W5 541 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 LKAAEAR1Q8TD35 194 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 NR4A3Q92570 626 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 IMMP1LQ96LU5 166 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 C10orf90Q96M02 699 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 OR2A5Q96R48 311 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 ZFYVE21Q9BQ24 234 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 KIFC1Q9BW19 673 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 TRIM5Q9C035 493 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 GNPTGQ9UJJ9 305 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 PLAGL1Q9UM63 463 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 DRG1Q9Y295 367 aaKnown RBP10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 ZKSCAN5Q9Y2L8 839 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 FAM169AQ9Y6X4 670 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 CELSR1Q9NYQ6 3014 aa10.69□□□□□ -0.7
CLSTN3-206ENST00000535668 KCNE1BA0A087WTH5 132 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 TCRBV7S2A1N4TA0A589 114 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 MASP2O00187 686 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 CD3EAPO15446 510 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 PSIP1O75475 530 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 ESR1P03372 595 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 PKMP14618 531 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 MCM3P25205 808 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 ARNTP27540 789 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 PTGER4P35408 488 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 GRIA1P42261 906 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 MAGEA6P43360 314 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 NPY2RP49146 381 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 PRAMEP78395 509 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 OCA2Q04671 838 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 PRDX1Q06830 199 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 BRD3Q15059 726 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 RNF187Q5TA31 235 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 FRMPD2BQ6IN97 320 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 H3F3CQ6NXT2 135 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 MTFR2Q6P444 385 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 FAM180AQ6UWF9 173 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 NAPRTQ6XQN6 538 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 AMER3Q8N944 861 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 ACBD4Q8NC06 268 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 MIEF2Q96C03 454 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 THOC3Q96J01 351 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 TAAR6Q96RI8 345 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 PLCD4Q9BRC7 762 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 CRB3Q9BUF7 120 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 ZNF700Q9H0M5 742 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 RUBCNLQ9H714 662 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 MKKSQ9NPJ1 570 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 IGSF5Q9NSI5 407 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 CATSPERZQ9NTU4 200 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 OLAHQ9NV23 265 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 RIC8BQ9NVN3 520 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 PAK5Q9P286 719 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 MARCH4Q9P2E8 410 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 C3orf18Q9UK00 162 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 SLC39A10Q9ULF5 831 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 KLHL20Q9Y2M5 609 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 NCOA6Q14686 2063 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 CPAMD8Q8IZJ3 1885 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 ZFHX3Q15911 3703 aa10.68□□□□□ -0.7
CLSTN3-206ENST00000535668 LOC105369274A0A096LPK9 316 aa10.67□□□□□ -0.7
CLSTN3-206ENST00000535668 IGHV1-45A0A0A0MS14 117 aa10.67□□□□□ -0.7
CLSTN3-206ENST00000535668 IGKV1-8A0A0C4DH67 115 aa10.67□□□□□ -0.7
CLSTN3-206ENST00000535668 LOC102723532A0A0G2JNH3 316 aa10.67□□□□□ -0.7
CLSTN3-206ENST00000535668 IDSB3KWA1 339 aa10.67□□□□□ -0.7
CLSTN3-206ENST00000535668 MAP2K7O14733 419 aa10.67□□□□□ -0.7
CLSTN3-206ENST00000535668 JRKO75564 520 aa10.67□□□□□ -0.7
CLSTN3-206ENST00000535668 OR1D4P47884 311 aa10.67□□□□□ -0.7
CLSTN3-206ENST00000535668 ABATP80404 500 aa10.67□□□□□ -0.7
CLSTN3-206ENST00000535668 KIF5AQ12840 1032 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms