RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 PRICKLE3O43900 615 aaPredicted RBP13.57□□□□□ -0.24
CMTM1-217ENST00000533666 KLK8O60259 260 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 CCNT2O60583 730 aaKnown RBP13.57□□□□□ -0.24
CMTM1-217ENST00000533666 KATNA1O75449 491 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 TOP3BO95985 862 aaKnown RBP13.57□□□□□ -0.24
CMTM1-217ENST00000533666 NELFEP18615 380 aaKnown RBP13.57□□□□□ -0.24
CMTM1-217ENST00000533666 GNAZP19086 355 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 PEBP1P30086 187 aaKnown RBP13.57□□□□□ -0.24
CMTM1-217ENST00000533666 GRK3P35626 688 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 MLLT3P42568 568 aaPredicted RBP13.57□□□□□ -0.24
CMTM1-217ENST00000533666 SEPHS1P49903 392 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 PPP1CAP62136 330 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 ACY1Q03154 408 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 FOXC1Q12948 553 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 SETDB1Q15047 1291 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 PDK4Q16654 411 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 AGBL2Q5U5Z8 902 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 RAB11FIP2Q7L804 512 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 TMPRSS9Q7Z410 1059 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 B3GNT8Q7Z7M8 397 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 LRRC56Q8IYG6 542 aaPredicted RBP13.57□□□□□ -0.24
CMTM1-217ENST00000533666 PTGR2Q8N8N7 351 aaPredicted RBP13.57□□□□□ -0.24
CMTM1-217ENST00000533666 C19orf47Q8N9M1 422 aaKnown RBP13.57□□□□□ -0.24
CMTM1-217ENST00000533666 WDR36Q8NI36 951 aaKnown RBP13.57□□□□□ -0.24
CMTM1-217ENST00000533666 SLC41A2Q96JW4 573 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 TRAPPC9Q96Q05 1148 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 NRTNQ99748 197 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 GPRC5BQ9NZH0 403 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 SLC22A14Q9Y267 594 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 PLLPQ9Y342 182 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 CACNA1AO00555 2505 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 HEATR5BQ9P2D3 2071 aa13.57□□□□□ -0.24
CMTM1-217ENST00000533666 SNRNP200O75643 2136 aaKnown RBP13.57□□□□□ -0.24
CMTM1-217ENST00000533666 IGHV5-51A0A0C4DH38 117 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 FOXO6A8MYZ6 492 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 K7EPI3 171 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 DYNC1I1O14576 645 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 TM9SF1O15321 606 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 ATP8B1O43520 1251 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 KIF1CO43896 1103 aaKnown RBP13.56□□□□□ -0.24
CMTM1-217ENST00000533666 PLIN3O60664 434 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 H2AFYO75367 372 aaKnown RBP13.56□□□□□ -0.24
CMTM1-217ENST00000533666 ZWINTO95229 277 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 JMJD7P0C870 316 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 MTHFD2P13995 350 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 CPA3P15088 417 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 EPB42P16452 691 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 NPPBP16860 134 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 SLC6A12P48065 614 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 HSPA7P48741 367 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 CCR8P51685 355 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 NFKB2Q00653 900 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 CDC16Q13042 620 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 GPS2Q13227 327 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 PCBP2Q15366 365 aaKnown RBP eCLIP13.56□□□□□ -0.249e-7■■■■□ 24.1
CMTM1-217ENST00000533666 TNFAIP8L3Q5GJ75 292 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 ZC3H12BQ5HYM0 836 aaKnown RBP13.56□□□□□ -0.24
CMTM1-217ENST00000533666 TMEM164Q5U3C3 297 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 C16orf46Q6P387 395 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 FIGLAQ6QHK4 219 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 ADCK2Q7Z695 626 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 TRIM73Q86UV7 250 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 EXOC3L1Q86VI1 746 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 BPHLQ86WA6 291 aaPredicted RBP13.56□□□□□ -0.24
CMTM1-217ENST00000533666 FAM129CQ86XR2 697 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 SNX31Q8N9S9 440 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 RCBTB1Q8NDN9 531 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 FLVCR1-AS1Q8TAF5 88 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 PPP4R1Q8TF05 950 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 SLC5A11Q8WWX8 675 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 PYCR2Q96C36 320 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 PHF21BQ96EK2 531 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 DPH7Q9BTV6 452 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 KCNK9Q9NPC2 374 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 TMEM184CQ9NVA4 438 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 BTRCQ9Y297 605 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 KLK4Q9Y5K2 254 aa13.56□□□□□ -0.24
CMTM1-217ENST00000533666 PTPRBP23467 1997 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 HMGB1P1B2RPK0 211 aaPredicted RBP13.55□□□□□ -0.24
CMTM1-217ENST00000533666 B4E171 279 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 PLD2O14939 933 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 TAPBPO15533 448 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 PRPF4O43172 522 aaKnown RBP eCLIP13.55□□□□□ -0.24
CMTM1-217ENST00000533666 SPAG7O75391 227 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 PROCP04070 461 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 ST6GAL1P15907 406 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 MAGP20916 626 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 CXCR2P25025 360 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 PSMB5P28074 263 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 TSPAN7P41732 249 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 GRIA3P42263 894 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 PDX1P52945 283 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 RAB15P59190 212 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 RELAQ04206 551 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 HSP90B2PQ58FF3 399 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 KIAA1614Q5VZ46 1190 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 ZYG11AQ6WRX3 759 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 CDHR3Q6ZTQ4 885 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 LSMEM2Q8N112 164 aa13.55□□□□□ -0.24
CMTM1-217ENST00000533666 D2HGDHQ8N465 521 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms