RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ACPPP15309 386 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 TTPAP49638 278 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 KIF5AQ12840 1032 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 MFAP5Q13361 173 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 FASTKQ14296 549 aaKnown RBP17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 VWA2Q5GFL6 755 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 SRRM1Q8IYB3 904 aaKnown RBP17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 OR2A1Q8NGT9 310 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 COG1Q8WTW3 980 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 MIEF2Q96C03 454 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 MRFAP1L1Q96HT8 127 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 C10orf90Q96M02 699 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 IL1RAPL1Q9NZN1 696 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 ZNF282Q9UDV7 671 aaPredicted RBP17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 GNPTGQ9UJJ9 305 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 C3orf18Q9UK00 162 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 MAP2K7O14733 419 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 FKBP9O95302 570 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 HPP00738 406 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 EIF3BP55884 814 aaKnown RBP17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 PER3P56645 1201 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 SESN2P58004 480 aaPredicted RBP17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 OCA2Q04671 838 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 FAM180AQ6UWF9 173 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 RNF44Q7L0R7 432 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 OTOAQ7RTW8 1153 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 LAPTM4BQ86VI4 370 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 TMEM139Q8IV31 216 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 OR1N1Q8NGS0 311 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 PEX13Q92968 403 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 PANX3Q96QZ0 392 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 BAG1Q99933 345 aaPredicted RBP17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 SLX1AQ9BQ83 275 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 ACAT2Q9BWD1 397 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 SYNPO2LQ9H987 977 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 KLK4Q9Y5K2 254 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 PDZD2O15018 2839 aa17.57■□□□□ 0.4
SSSCA1-206ENST00000531405 CSMD2Q7Z408 3487 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 ARHGAP10A1A4S6 786 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 FBLP22087 321 aaKnown RBP17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 NMBRP28336 390 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 TNFRSF8P28908 595 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 CARSP49589 748 aaKnown RBP17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 ZRSR2Q15696 482 aaKnown RBP17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 PCID2Q5JVF3 399 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 CTSL3PQ5NE16 218 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 SEL1L2Q5TEA6 688 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 ATG9BQ674R7 924 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 FJX1Q86VR8 437 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 RAB42Q8N4Z0 105 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 AMER2Q8N7J2 671 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 HMGCLL1Q8TB92 370 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 FAM136AQ96C01 138 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 VPS50Q96JG6 964 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 MAGEB10Q96LZ2 347 aaPredicted RBP17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 LMF1Q96S06 567 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 TREX1Q9NSU2 369 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 OLAHQ9NV23 265 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 PLA2G3Q9NZ20 509 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 PTGFRNQ9P2B2 879 aa17.56■□□□□ 0.4
SSSCA1-206ENST00000531405 OR2A25A4D2G3 310 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 NDUFS3O75489 264 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 F10P00742 488 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 CELA2AP08217 269 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 ERVK-10P10266 1014 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 COX6A1P12074 109 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 PRF1P14222 555 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 RPL22P35268 128 aaKnown RBP17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 ARG2P78540 354 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 EEF1A2Q05639 463 aaKnown RBP17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 KCTD19Q17RG1 926 aaPredicted RBP17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 FAAH2Q6GMR7 532 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 PRMT9Q6P2P2 845 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 FBXO42Q6P3S6 717 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 SLC13A5Q86YT5 568 aaPredicted RBP17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 KBTBD2Q8IY47 623 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 OTUD6BQ8N6M0 293 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 SIRT6Q8N6T7 355 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 BCORP1Q8N888 145 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 CCDC89Q8N998 374 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 BRIX1Q8TDN6 353 aaKnown RBP17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 PSMF1Q92530 271 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 MARVELD3Q96A59 401 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 CABS1Q96KC9 395 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 ZFYVE21Q9BQ24 234 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 DPH7Q9BTV6 452 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 PAK5Q9P286 719 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 CELSR1Q9NYQ6 3014 aa17.55■□□□□ 0.4
SSSCA1-206ENST00000531405 NSG1A0A0A6YYJ2 146 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 GOLGA8KD6RF30 607 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 H0YGG7 62 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 GOLGA8TH3BQL2 631 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 KPNA5O15131 536 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 NIPSNAP2O75323 286 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 JRKO75564 520 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 PRR35P0CG20 571 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 RPS3P23396 243 aaKnown RBP eCLIP17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 CCNFP41002 786 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 KCNK10P57789 538 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 ARF3P61204 181 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms